Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_G09
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.21
AF068709-3|AAC19254.1| 332|Caenorhabditis elegans Serpentine re... 31 1.1
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 31 1.5
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 31 1.5
Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical pr... 31 1.5
AC024200-14|AAF36005.1| 557|Caenorhabditis elegans Hypothetical... 31 1.5
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 30 2.0
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 30 2.6
AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical ... 30 2.6
Z81096-2|CAB03162.1| 264|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z72509-4|CAA96648.3| 405|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical ... 29 4.5
AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical ... 29 4.5
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 6.0
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 6.0
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 439 EAVKKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPVVVR 594
E K+ EK+ E + +R ++ REK ++ + R + + TPV++R
Sbjct: 237 EREKEREKEREKEREKQKEREKEREKEREKEKKREEEARRKKEEASTPVIIR 288
>AF068709-3|AAC19254.1| 332|Caenorhabditis elegans Serpentine
receptor, class t protein28 protein.
Length = 332
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 599 NLLTI*IPTL-YHPLCNFLSDNPKILKNRTTGSLKLMETQILTPNKEICIQAQMDHAQCL 775
NLL + I L Y LC L + ++++ T +K M QI + IC Q +
Sbjct: 205 NLLVVGITCLLYTSLCCVLGEKFNMIEDTTNSKMKNMSLQIFFQSALICAINQ------V 258
Query: 776 LQVLWDLI*FAPFPIWVLV 832
+++ ++ F P+W+++
Sbjct: 259 ASIIYVIMNFVDVPLWIIM 277
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/91 (28%), Positives = 41/91 (45%)
Frame = +1
Query: 445 VKKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPVVVRRESVDNINTN 624
VKK +D +SDS+ D G K A+ TPV + ES + +++
Sbjct: 72 VKKMAAKDSSDSDSS-------DDGAVKKNGVQKPVNVAAKKSATPVQKKAESSSSSDSD 124
Query: 625 SIPSLMQFPVRQPKDSEEQDNWKSKTDGDSD 717
+ P+ PV++P + Q S +D DSD
Sbjct: 125 A-PAKKLTPVKKPAQTPAQKKAASSSDSDSD 154
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/91 (28%), Positives = 41/91 (45%)
Frame = +1
Query: 445 VKKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPVVVRRESVDNINTN 624
VKK +D +SDS+ D G K A+ TPV + ES + +++
Sbjct: 72 VKKMAAKDSSDSDSS-------DDGAVKKNGVQKPVNVAAKKSATPVQKKAESSSSSDSD 124
Query: 625 SIPSLMQFPVRQPKDSEEQDNWKSKTDGDSD 717
+ P+ PV++P + Q S +D DSD
Sbjct: 125 A-PAKKLTPVKKPAQTPAQKKAASSSDSDSD 154
>Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical
protein K01C8.5 protein.
Length = 707
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTD-RGRNRAQSPITPVV-----VRRESVD 609
K P + +++ ++S ++ E + + T R N ++S +P + R S
Sbjct: 289 KTPIQHNKNRTESRLHQKEKSSSDEEVHEKSTSSRHSNVSRSSKSPYLNDDRAPSRGSKC 348
Query: 610 NINTNSIPSLMQFPVRQPKDSEEQDNWKSKTDGDSDSNSEQGNM 741
+ +S P L+ + KDS++ DNWK+ S S+ M
Sbjct: 349 TSSHHSTPKLLTPSPQYLKDSDDDDNWKNSIPFMSSSDGAGAGM 392
>AC024200-14|AAF36005.1| 557|Caenorhabditis elegans Hypothetical
protein Y71F9AL.4 protein.
Length = 557
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = +1
Query: 457 EKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPVVVRRESVDNI-NTNSIP 633
EK + +NT R S G+++ + + P+ R+ SV+ I N + P
Sbjct: 51 EKVNMKIGPANTPRGKSKPTGKKRDEKRKSVSKEEDDEKPAPLE-RQRSVEQIANMENTP 109
Query: 634 -SLMQFPVR--QPKDSEEQDNWKSKTDGDSDSNSEQGNM 741
S+++ P +PK S E+D K D D D SE+ ++
Sbjct: 110 ESVLKPPDNNGKPKPSHEKDAKVKKNDDDDDLGSEKKDL 148
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Frame = +1
Query: 472 DNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPVVVRRESVDNINTNSIPSLMQFP 651
DN +S R +GDR E R + A S + P RR + TN +
Sbjct: 1622 DNRESMEDERSAGDRASESQETLRIRHDSTATSTV-PTPRRRRLLSGNTTNDTNEDNEER 1680
Query: 652 VRQPK--DSEEQDNWKSKTDGDSDSNSEQ 732
QP+ D E + D D D + E+
Sbjct: 1681 NGQPREFDGESSSSDDDNDDDDDDDDEEE 1709
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Frame = +1
Query: 472 DNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPVVVRRESVDNINTNSIPSLMQFP 651
DN +S R +GDR E R + A S + P RR + TN +
Sbjct: 1622 DNRESMEDERSAGDRASESQETLRIRHDSTATSTV-PTPRRRRLLSGNTTNDTNEDNEER 1680
Query: 652 VRQPK--DSEEQDNWKSKTDGDSDSNSEQ 732
QP+ D E + D D D + E+
Sbjct: 1681 NGQPREFDGESSSSDDDNDDDDDDDDEEE 1709
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 29.9 bits (64), Expect = 2.6
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Frame = +1
Query: 445 VKKPEKQDEDNSDSNTQ----RRHSGDRGREKYRRWTDRGRN---RAQ-SPITPVVVRRE 600
+KKP+K+ ED + H ++ +E++ D RA+ +P +P + RR
Sbjct: 214 IKKPKKKPEDLERRRHRVKKTEEHEEEKDKEEHHESNDENMEFDTRARGAPSSPKLTRRA 273
Query: 601 SVDNINTNSIPSLMQFPVRQPKDSEEQDNWKSKTDGDSDSNSEQ 732
+ + + L + P E DN S+ DGD DS+ E+
Sbjct: 274 KRSESSDDEV-ELQKTP-------EIDDNKPSRKDGDHDSDMEE 309
>AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical
protein C54E4.1 protein.
Length = 245
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 588 HHRSNGTLSSITAPVGPSP 532
HHRSN T S+T+ V P P
Sbjct: 203 HHRSNSTKKSVTSSVSPKP 221
>Z81096-2|CAB03162.1| 264|Caenorhabditis elegans Hypothetical
protein K03H4.2 protein.
Length = 264
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 541 TDRGRNRAQSPITPVVVRRESVDNINTNSIPSLMQFP 651
+D GR R+ + ITP + E+ DN+ IP + P
Sbjct: 103 SDTGRRRSVNLITPSPIPEETEDNLTETPIPVVEHIP 139
>Z72509-4|CAA96648.3| 405|Caenorhabditis elegans Hypothetical
protein F32G8.4 protein.
Length = 405
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 702 SFRLPVVLFFRIFGLSDRKLHKGWYRVGIYIVNRFSSD 589
S + + F IF + GW +VG Y++N F D
Sbjct: 252 SMEKEITILFPIFTTFQMLFYLGWLKVGQYLMNPFGED 289
>AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical
protein Y25C1A.8b protein.
Length = 219
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 454 PEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNR 561
PE +DE D + S +R RE +R+ ++ R+R
Sbjct: 117 PESEDEKEKDRRKMHKTSRERDRESHRKRSNSPRDR 152
>AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical
protein Y25C1A.8a protein.
Length = 345
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 454 PEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNR 561
PE +DE D + S +R RE +R+ ++ R+R
Sbjct: 243 PESEDEKEKDRRKMHKTSRERDRESHRKRSNSPRDR 278
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSP 573
KK K+ + + + + +RR S R R R +R R R++SP
Sbjct: 77 KKDRKKKDRSRERDRERRSSRSRSRSPRDRDRERRRRRSRSP 118
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSP 573
KK K+ + + + + +RR S R R R +R R R++SP
Sbjct: 77 KKDRKKKDRSRERDRERRSSRSRSRSPRDRDRERRRRRSRSP 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.310 0.125 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,260,516
Number of Sequences: 27780
Number of extensions: 351099
Number of successful extensions: 908
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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