Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_G08
(792 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein. 117 6e-26
D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein. 117 6e-26
BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate sy... 117 6e-26
AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate sy... 117 6e-26
M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl ... 116 1e-25
Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate sy... 108 3e-23
BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein. 90 1e-17
AL139333-5|CAI15284.1| 2369|Homo sapiens dopey family member 1 p... 38 0.055
AL139333-4|CAM21599.1| 2465|Homo sapiens dopey family member 1 p... 38 0.055
AL121716-2|CAI42426.1| 2369|Homo sapiens dopey family member 1 p... 38 0.055
AL121716-1|CAI42425.2| 2465|Homo sapiens dopey family member 1 p... 38 0.055
>J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein.
Length = 353
Score = 117 bits (281), Expect = 6e-26
Identities = 52/122 (42%), Positives = 80/122 (65%), Gaps = 3/122 (2%)
Frame = +2
Query: 434 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMF 604
P+IGD LK++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+
Sbjct: 36 PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELL 95
Query: 605 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYM 784
QA+ +V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK R P Y+
Sbjct: 96 QAFFLVADDIMDSSLTRRGQTCWYQKPGVGLD-AINDANLLEACIYRLLKLYCREQPYYL 154
Query: 785 KM 790
+
Sbjct: 155 NL 156
>D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein.
Length = 420
Score = 117 bits (281), Expect = 6e-26
Identities = 60/172 (34%), Positives = 98/172 (56%), Gaps = 3/172 (1%)
Frame = +2
Query: 284 WPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDW---L 454
W + R +S M + EK+ F +++ L + ++ P+IGD L
Sbjct: 55 WTEEPRALCSSLRMNGDQNSDVYAQEKQDFVQHFSQIVRVL-TEDEMGH-PEIGDAIARL 112
Query: 455 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDI 634
K++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+ QA+ +V DDI
Sbjct: 113 KEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI 172
Query: 635 MDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKM 790
MD S RRG CWY++P VG+ A ND+ L+ + ++ LK R P Y+ +
Sbjct: 173 MDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLYCREQPYYLNL 223
>BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 117 bits (281), Expect = 6e-26
Identities = 60/172 (34%), Positives = 98/172 (56%), Gaps = 3/172 (1%)
Frame = +2
Query: 284 WPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDW---L 454
W + R +S M + EK+ F +++ L + ++ P+IGD L
Sbjct: 54 WTEEPRALCSSLRMNGDQNSDVYAQEKQDFVQHFSQIVRVL-TEDEMGH-PEIGDAIARL 111
Query: 455 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDI 634
K++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+ QA+ +V DDI
Sbjct: 112 KEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI 171
Query: 635 MDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKM 790
MD S RRG CWY++P VG+ A ND+ L+ + ++ LK R P Y+ +
Sbjct: 172 MDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLYCREQPYYLNL 222
>AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 117 bits (281), Expect = 6e-26
Identities = 60/172 (34%), Positives = 98/172 (56%), Gaps = 3/172 (1%)
Frame = +2
Query: 284 WPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDW---L 454
W + R +S M + EK+ F +++ L + ++ P+IGD L
Sbjct: 54 WTEEPRALCSSLRMNGDQNSDVYAQEKQDFVQHFSQIVRVL-TEDEMGH-PEIGDAIARL 111
Query: 455 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDI 634
K++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+ QA+ +V DDI
Sbjct: 112 KEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI 171
Query: 635 MDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKM 790
MD S RRG CWY++P VG+ A ND+ L+ + ++ LK R P Y+ +
Sbjct: 172 MDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLYCREQPYYLNL 222
>M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl
pyrophosphate synthetase mRNA (hpt807), 3' end. ).
Length = 346
Score = 116 bits (279), Expect = 1e-25
Identities = 52/122 (42%), Positives = 80/122 (65%), Gaps = 3/122 (2%)
Frame = +2
Query: 434 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMF 604
P+IGD LK++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+
Sbjct: 29 PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELL 88
Query: 605 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYM 784
QA+ +V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK R P Y+
Sbjct: 89 QAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLYCREQPYYL 147
Query: 785 KM 790
+
Sbjct: 148 NL 149
>Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate
synthetase like-4 protein.
Length = 348
Score = 108 bits (259), Expect = 3e-23
Identities = 49/122 (40%), Positives = 77/122 (63%), Gaps = 3/122 (2%)
Frame = +2
Query: 434 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMF 604
P+IGD LK++L YN +GGK+ R +T ++++ + P K +L+ A +GWCVE+
Sbjct: 31 PEIGDAIARLKEVLEYNAIGGKYNRRLTVAVAFRELVDPRKQDADSLQRAWTVGWCVELL 90
Query: 605 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYM 784
QA+ +V DDIMD S RRG CWY++P VG+ A +D+ L+ + ++ LK R P Y+
Sbjct: 91 QAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AIDDANLLEACIYPLLKLYCREQPYYL 149
Query: 785 KM 790
+
Sbjct: 150 NL 151
>BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein.
Length = 298
Score = 89.8 bits (213), Expect = 1e-17
Identities = 41/122 (33%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Frame = +2
Query: 434 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMF 604
P+ GD LK++L YN +GGK+ RG+ +++++ + +P K+ +L+ A +GW ++
Sbjct: 4 PETGDATARLKEVLEYNAIGGKYHRGLMVLVAFRELVEPRKLDADSLQWAPTVGWYAQLL 63
Query: 605 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYM 784
QA+ +V DDIMD S +G WY++ +G+ A ND++L+ + ++ LK R P Y+
Sbjct: 64 QAFFLVADDIMDSSLTCQGQISWYQKLGMGLD-AINDAILLEACIYCLLKLYCREQPYYL 122
Query: 785 KM 790
+
Sbjct: 123 NL 124
>AL139333-5|CAI15284.1| 2369|Homo sapiens dopey family member 1
protein.
Length = 2369
Score = 37.5 bits (83), Expect = 0.055
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 299 RYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKKMLH 469
+Y+N A + A KN E +E L ++ LQN +K VP+ IG L + LH
Sbjct: 13 KYRNYVAAIDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQCLH 72
Query: 470 YNLVGGKHTRGITTV-ISYKTI 532
L GG H + + T I +K I
Sbjct: 73 PALPGGVHRKALETYEIIFKII 94
>AL139333-4|CAM21599.1| 2465|Homo sapiens dopey family member 1
protein.
Length = 2465
Score = 37.5 bits (83), Expect = 0.055
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 299 RYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKKMLH 469
+Y+N A + A KN E +E L ++ LQN +K VP+ IG L + LH
Sbjct: 13 KYRNYVAAIDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQCLH 72
Query: 470 YNLVGGKHTRGITTV-ISYKTI 532
L GG H + + T I +K I
Sbjct: 73 PALPGGVHRKALETYEIIFKII 94
>AL121716-2|CAI42426.1| 2369|Homo sapiens dopey family member 1
protein.
Length = 2369
Score = 37.5 bits (83), Expect = 0.055
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 299 RYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKKMLH 469
+Y+N A + A KN E +E L ++ LQN +K VP+ IG L + LH
Sbjct: 13 KYRNYVAAIDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQCLH 72
Query: 470 YNLVGGKHTRGITTV-ISYKTI 532
L GG H + + T I +K I
Sbjct: 73 PALPGGVHRKALETYEIIFKII 94
>AL121716-1|CAI42425.2| 2465|Homo sapiens dopey family member 1
protein.
Length = 2465
Score = 37.5 bits (83), Expect = 0.055
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 299 RYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKKMLH 469
+Y+N A + A KN E +E L ++ LQN +K VP+ IG L + LH
Sbjct: 13 KYRNYVAAIDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQCLH 72
Query: 470 YNLVGGKHTRGITTV-ISYKTI 532
L GG H + + T I +K I
Sbjct: 73 PALPGGVHRKALETYEIIFKII 94
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,096,057
Number of Sequences: 237096
Number of extensions: 2445919
Number of successful extensions: 4376
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4370
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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