Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_G06
         (832 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    24   1.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.2  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   5.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.1  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -1

Query: 811 AQXEQELAVHLRVVVLRSGATVRPAAHYGLGAMIEIVE 698
           AQ + +L  H R +       VR AA   LG + ++VE
Sbjct: 162 AQMKADLRSHFRALCQDDTPMVRRAAATKLGELAQVVE 199


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 365 DEQTKHMLIEKYYDL 409
           +EQ  H+ IEKYY++
Sbjct: 318 EEQVYHLEIEKYYNI 332


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 785 PSPCRSTPVRCNSTSSCPLWP 723
           PSP RS+P+     S  P  P
Sbjct: 78  PSPKRSSPILAEKVSVSPTTP 98


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 353 IFQLDEQTKHMLIEKYY 403
           + +LD + KHMLI K Y
Sbjct: 111 LHKLDNKLKHMLIWKSY 127


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 648 MNTTAPYFFASGSDSKNVLLILATTFPGISSTALNTLR 535
           M   A  FF++G+D+ ++ L L      ++ T  + LR
Sbjct: 288 MAAQAIAFFSAGNDTTSITLALTCYELSLNKTIQDRLR 325


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 800  AGTRGPSPCRSTPVRCNSTSSCPLWP 723
            A T G    R+TP+ C +    P  P
Sbjct: 1179 AYTSGGDGVRTTPIHCQTEQDVPEAP 1204


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,791
Number of Sequences: 336
Number of extensions: 4242
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)