Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_G04
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   1.3  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    24   1.3  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   2.3  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.3  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   2.3  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   2.3  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   2.3  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   2.3  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   2.3  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     23   2.3  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    23   3.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   4.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   4.0  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   9.2  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 97 YCHENTNNC 71
          YCHEN N+C
Sbjct: 64 YCHENINDC 72


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 122 ILGIFPSLDRTNYLTYRDLFKE 187
           ILG++P +    Y   RD+F++
Sbjct: 11  ILGVYPEIQEKVYQELRDIFQD 32


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 65  KRTIVCIFVTIILTTDCYKILGIFPSLDRTNYLTY 169
           K  ++ I V+ I   D Y I G+  ++D  N +TY
Sbjct: 170 KGHLLTIAVSAIPIDDAYDIPGMSENVDVINLMTY 204


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 558 NRL*CQGCKGF 526
           N L C+GCKGF
Sbjct: 201 NALTCEGCKGF 211


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +2

Query: 524 PKPLQPWH 547
           PKP++PWH
Sbjct: 60  PKPVEPWH 67


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +2

Query: 524 PKPLQPWH 547
           PKP++PWH
Sbjct: 60  PKPVEPWH 67


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +2

Query: 524 PKPLQPWH 547
           PKP++PWH
Sbjct: 60  PKPVEPWH 67


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +2

Query: 524 PKPLQPWH 547
           PKP++PWH
Sbjct: 60  PKPVEPWH 67


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +2

Query: 524 PKPLQPWH 547
           PKP++PWH
Sbjct: 60  PKPVEPWH 67


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +1

Query: 199 KQRCDPDQPL 228
           ++RCDPD+PL
Sbjct: 182 EERCDPDRPL 191


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/39 (25%), Positives = 14/39 (35%)
 Frame = +2

Query: 524 PKPLQPWHYNRLGINFNAAYVTQTGLSYGKNPWFLDRVR 640
           P     +   R  + F      Q G   G+N WF  + R
Sbjct: 56  PTKSSKYPIKRKRVRFQTRVKVQEGSKSGRNKWFFQKGR 94


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +2

Query: 143 LDRTNYLTYRDLFKELANRNNDVTLISHFPMSDAPASYRDILL 271
           LD    LT   + KE+A     V    H P S+  + +  +LL
Sbjct: 250 LDSFMALTVMQVLKEMAMTGKTVICTIHQPSSEVYSMFDKLLL 292



 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 77  VCIFVTIILTTDCYKILGI 133
           + I + +ILT+ CY ++G+
Sbjct: 501 IFIIIPVILTSVCYFMIGL 519


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +2

Query: 143 LDRTNYLTYRDLFKELANRNNDVTLISHFPMSDAPASYRDILL 271
           LD    LT   + KE+A     V    H P S+  + +  +LL
Sbjct: 250 LDSFMALTVMQVLKEMAMTGKTVICTIHQPSSEVYSMFDKLLL 292


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 546 CQGCKGF 526
           C+GCKGF
Sbjct: 103 CEGCKGF 109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,189
Number of Sequences: 336
Number of extensions: 4611
Number of successful extensions: 23
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)