Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_G04
         (844 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1159 + 9224331-9224473,9224586-9224727,9225412-9225483,922...    31   0.87 
01_06_0089 + 26314805-26315449,26317228-26317845                       31   1.5  
09_04_0619 - 19001350-19001359,19001737-19001800,19001955-190020...    29   6.1  
02_04_0305 - 21873195-21873788,21873878-21874019,21874597-218747...    28   8.1  

>01_01_1159 +
           9224331-9224473,9224586-9224727,9225412-9225483,
           9225853-9225933,9226031-9226144,9226770-9226826,
           9227209-9227310,9227617-9227767,9227851-9227927,
           9228721-9228828,9229684-9229754,9230546-9230687,
           9230903-9231001,9231112-9231240,9231445-9231559,
           9231786-9231853,9233410-9233523,9233587-9233703,
           9234079-9234132,9234221-9234326,9235272-9235402,
           9235489-9235557
          Length = 753

 Score = 31.5 bits (68), Expect = 0.87
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
 Frame = +2

Query: 218 ISHFPMSDAPASYRDILLSDRHVYKGLSFESVIASEVSRVPFETLVATKAGNDDCKTLMN 397
           I++F         +DI LS  HV +G++   +IA +V    FE    T+ GN + + ++ 
Sbjct: 409 INNFAKKSKTLKDKDISLSGEHVREGMT--CIIAVKVPNPEFEGQTKTRLGNPEVRRIVE 466

Query: 398 NN---QVLHLIRTRPQ-YDVVLVESFNSDCGIALAA 493
            +    +   +   P   D +L +S N+    ALAA
Sbjct: 467 QSVQENLTEYLELHPDVLDSILSKSLNA-LKAALAA 501


>01_06_0089 + 26314805-26315449,26317228-26317845
          Length = 420

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
 Frame = +2

Query: 329 SRVPFET----LVATKAGNDDCKTLMNNNQVLHLIRTRPQYDVV---LVESFNSDCGIAL 487
           SRVP       L + + G+D  K   ++   L L+R R   D+V   L  +F  D G  L
Sbjct: 264 SRVPVPVTAIALASPRVGDDQFKRAFDSTSNLSLLRVRNAPDIVPTILPSAFFKDVGAEL 323

Query: 488 AANL-SAPYIALNPKPLQPWH 547
             +   +PY+  NP     WH
Sbjct: 324 LVDTRRSPYLK-NPAGPAQWH 343


>09_04_0619 -
           19001350-19001359,19001737-19001800,19001955-19002099,
           19002434-19002917,19003175-19003260,19003417-19003484,
           19003565-19003709,19004561-19004677
          Length = 372

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = +2

Query: 551 NRLGINFNAAYVTQTGLSYGKNPWFLDRVRGYILYHITNWVYYVGSQITDHVYLYKYLGD 730
           N+ G++       +    + K    +   +G++ + +T    Y  SQITD V + +YLG 
Sbjct: 64  NKAGVDLPKETAEEIRPCWSKPRSNVQESKGFVTFSLTMGPEYHISQITDAVVIARYLGA 123

Query: 731 NL 736
            L
Sbjct: 124 TL 125


>02_04_0305 -
           21873195-21873788,21873878-21874019,21874597-21874782,
           21874911-21875058,21875172-21875269,21875384-21875469,
           21875741-21875825,21879298-21879478,21879682-21879874,
           21881429-21881566,21881892-21881900
          Length = 619

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 523 PEAFTALALQSIRYQFQCSLCNPNRLIVRKKSLVPRPSKRL 645
           PEA    A + +R   Q S C+  RL+ R   +VP P ++L
Sbjct: 531 PEASMEEAKREMRRVLQGSRCDLLRLVTRDGGVVPPPCRKL 571


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,632,051
Number of Sequences: 37544
Number of extensions: 437048
Number of successful extensions: 931
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)