Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_G04
(844 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 2.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.5
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 23 3.5
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 23 3.5
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 23 3.5
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 3.5
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 6.2
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 6.2
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 6.2
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 6.2
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 6.2
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 6.2
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 6.2
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 6.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 6.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 6.2
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 8.1
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2
Query: 558 NRL*CQGCKGF 526
N L C+GCKGF
Sbjct: 200 NALTCEGCKGF 210
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 3.5
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = +2
Query: 623 FLDRVRGYILYHITNWVYYVGSQITDHVYLYKYLGDNLPSLETLASNAXLVFVNTH 790
FL +R +L N + ++ +++ ++ + L S++ + SNA L N H
Sbjct: 331 FLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSIDRIESNAFLPLYNLH 386
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 23.0 bits (47), Expect = 3.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 531 GFGFNAMYGALKFAANAIPQSLLNDSTSTTS 439
G F+A+YGAL N I + + DS S T+
Sbjct: 588 GVSFSAVYGALLTKTNRIAR--IFDSASRTA 616
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 23.0 bits (47), Expect = 3.5
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 416 LIRTRPQYDVVLVESFNSDCGIALAANLSAPYIALNPKPLQPWH 547
L+R P+ VL + + GI A P P P++PWH
Sbjct: 46 LVRGFPR--TVLDKEVHVFYGIPFAKPPIGPLRFRKPLPIEPWH 87
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 23.0 bits (47), Expect = 3.5
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 416 LIRTRPQYDVVLVESFNSDCGIALAANLSAPYIALNPKPLQPWH 547
L+R P+ VL + + GI A P P P++PWH
Sbjct: 46 LVRGFPR--TVLDKEVHVFYGIPFAKPPIGPLRFRKPLPIEPWH 87
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.0 bits (47), Expect = 3.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 531 GFGFNAMYGALKFAANAIPQSLLNDSTSTTS 439
G F+A+YGAL N I + + DS S T+
Sbjct: 678 GVSFSAVYGALLTKTNRIAR--IFDSASRTA 706
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 152 TNYLTYRDLFKELANRNNDVTLIS 223
+NY + + FK+L N +N + L S
Sbjct: 6 SNYSHHDEKFKQLRNEDNKIDLRS 29
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 152 TNYLTYRDLFKELANRNNDVTLIS 223
+NY + + FK+L N +N + L S
Sbjct: 6 SNYSHHDEKFKQLRNEDNKIDLRS 29
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 152 TNYLTYRDLFKELANRNNDVTLIS 223
+NY + + FK+L N +N + L S
Sbjct: 6 SNYSHHDEKFKQLRNEDNKIDLRS 29
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 152 TNYLTYRDLFKELANRNNDVTLIS 223
+NY + + FK+L N +N + L S
Sbjct: 6 SNYSHHDEKFKQLRNEDNKIDLRS 29
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 152 TNYLTYRDLFKELANRNNDVTLIS 223
+NY + + FK+L N +N + L S
Sbjct: 6 SNYSHHDEKFKQLRNEDNKIDLRS 29
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 152 TNYLTYRDLFKELANRNNDVTLIS 223
+NY + + FK+L N +N + L S
Sbjct: 6 SNYSHHDEKFKQLRNEDNKIDLRS 29
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 152 TNYLTYRDLFKELANRNNDVTLIS 223
+NY + + FK+L N +N + L S
Sbjct: 6 SNYSHHDEKFKQLRNEDNKIDLRS 29
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 152 TNYLTYRDLFKELANRNNDVTLIS 223
+NY + + FK+L N +N + L S
Sbjct: 6 SNYSYHDEKFKQLRNEDNKIDLRS 29
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 152 TNYLTYRDLFKELANRNNDVTLIS 223
+NY + + FK+L N +N + L S
Sbjct: 6 SNYSHHDEKFKQLRNEDNKIDLRS 29
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 152 TNYLTYRDLFKELANRNNDVTLIS 223
+NY + + FK+L N +N + L S
Sbjct: 6 SNYSYHDEKFKQLRNEDNKIDLRS 29
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 188 VL*INHGKSNSWCDPAMEIFPVFYNSQLLVL 96
V+ ++HG S CD +E FP ++ Q VL
Sbjct: 119 VVWLSHGIFRSSCDIDVEFFP--FDEQRCVL 147
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,357
Number of Sequences: 438
Number of extensions: 5155
Number of successful extensions: 26
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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