Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_F23
(460 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 110 6e-25
12_02_0870 - 23852923-23853228,23853416-23853728,23853813-238539... 80 1e-15
04_04_1275 + 32321161-32321285,32321849-32322071,32322187-323223... 66 1e-11
01_06_0938 - 33179237-33179362,33179485-33179668,33180114-331804... 55 3e-08
08_01_0530 - 4593665-4594006,4594169-4594285,4594417-4594504,459... 50 9e-07
02_05_1012 - 33495325-33495486,33495781-33495897,33496193-334962... 48 3e-06
08_01_0927 - 9123473-9123589,9124534-9124616,9125177-9125252,912... 39 0.002
08_01_0926 - 9121926-9122090,9122376-9122492,9122640-9122741 29 1.4
08_01_1011 + 10226160-10226676,10226794-10226810,10227677-102278... 28 4.2
11_06_0209 + 21282079-21282369,21287029-21287137,21287462-212875... 27 5.5
11_02_0117 + 8480350-8480424,8480958-8481223,8481254-8481374,848... 27 5.5
04_04_1577 + 34554819-34554995,34555672-34555754,34555906-345562... 27 7.3
03_06_0777 + 36181095-36181311,36181444-36181530,36181785-361827... 27 7.3
03_04_0018 - 16484109-16484300,16484575-16484656,16484746-164848... 27 7.3
12_02_1262 + 27415191-27415279,27415367-27415565,27415635-274157... 27 9.6
08_01_0440 + 3875422-3875619,3875710-3876382,3876449-3877943,387... 27 9.6
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 110 bits (264), Expect = 6e-25
Identities = 59/144 (40%), Positives = 81/144 (56%), Gaps = 3/144 (2%)
Frame = +3
Query: 36 GSQSEDNSQILVMNNYFGIGIDADLCLDFHNAREENPNKFNSRLRNKGVYVKMGLRKMVG 215
G++ + Q+ M NY G+G DA + DFH REE P+KF S+ NK +Y + G + ++
Sbjct: 474 GAEDQCTKQVKFMTNYIGVGCDAKVAYDFHTTREEKPDKFCSQFVNKLIYAREGAKDIMD 533
Query: 216 RKMCKDLHKAVKLEVDGRPVELPA-VEGIIILNILSWGSGANPW--GPEKDDXFNXPNHW 386
R C DL V LEVDG+ VE+P EG+I+LNI S+ G + W E DD F +
Sbjct: 534 RS-CSDLPWHVSLEVDGKNVEIPEDAEGVIVLNIPSYMGGVDLWQNDNEHDDDFGLQSMH 592
Query: 387 DGMLDXXXXXXXXHLGXIQSGLLR 458
D ML+ HLG +Q GL R
Sbjct: 593 DKMLEVVCISGTWHLGKLQVGLSR 616
>12_02_0870 -
23852923-23853228,23853416-23853728,23853813-23853938,
23854038-23854243,23854311-23854443,23854607-23854688,
23854785-23854914,23855034-23855126,23855211-23855333,
23855786-23855977,23858230-23858394,23858697-23858768,
23858826-23858945,23859873-23859949,23860032-23860398,
23860738-23861871
Length = 1212
Score = 79.8 bits (188), Expect = 1e-15
Identities = 56/167 (33%), Positives = 78/167 (46%), Gaps = 27/167 (16%)
Frame = +3
Query: 39 SQSEDNSQILVMNNYFGIGIDADLCLDFHNAREENPNKFNSRLRNKGVYVKMGLRKMVGR 218
+Q + SQ MNNYFG+G DA + LD HN REENP +F S+ NK +Y K G + M+
Sbjct: 485 NQGKLMSQPKYMNNYFGVGCDAKVALDIHNLREENPERFYSQFMNKVLYAKEGAKNMMDN 544
Query: 219 KMCKDLHKAVKLEVDGRPVELPAV-------------------------EGIIILNILSW 323
VKLE+DG + +P + EGI++ NI S+
Sbjct: 545 TF-DYFPWDVKLEIDGSKINIPQLIIPPVFKVKCDAQVHMILINYLNDSEGILVANIQSY 603
Query: 324 GSGANPWGPEKD--DXFNXPNHWDGMLDXXXXXXXXHLGXIQSGLLR 458
G + W E D D F+ + D ML+ HLG +Q +R
Sbjct: 604 MGGVDLWKNEDDVSDNFHPQSMHDKMLEVVSFTGMLHLGRLQLKQMR 650
>04_04_1275 +
32321161-32321285,32321849-32322071,32322187-32322309,
32322391-32322519,32322939-32323024,32323233-32323356,
32323531-32323579,32323808-32323890,32323975-32324042,
32324187-32324264,32324460-32324547,32324640-32324756,
32324844-32325176
Length = 541
Score = 66.1 bits (154), Expect = 1e-11
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 12/102 (11%)
Frame = +3
Query: 78 NYFGIGIDADLCLDFHNAREENPNKFNSRLRNKGVYVKMGLRK-----MVGRKMCKDLHK 242
NYF +G+DA + +FH+ R+ NP KF ++L N+ Y K+GL++ + +++ +
Sbjct: 282 NYFSMGMDAQVSYEFHSERKRNPEKFKNQLTNQSTYAKLGLKQGWFAASLTHPSSRNIAQ 341
Query: 243 AVKLEVDGRP------VELP-AVEGIIILNILSWGSGANPWG 347
K+ + RP +++P ++ I+ LN+ S+ G NPWG
Sbjct: 342 LAKVRIMKRPGGQWEELKIPRSIRSIVCLNLPSFSGGLNPWG 383
>01_06_0938 -
33179237-33179362,33179485-33179668,33180114-33180409,
33180702-33180821,33180931-33181018,33181352-33181426,
33181565-33181632,33181770-33181852,33182010-33182058,
33183006-33183126,33183225-33183310,33183782-33183910,
33184033-33184155,33184277-33184486,33185217-33185240
Length = 593
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Frame = +3
Query: 78 NYFGIGIDADLCLDFHNAREENPNKFNSRLRNKGVYVKMGLRK-----MVGRKMCKDLHK 242
NYF +G+DA + FH+ R+ +P KF ++L N+ Y+K+ + + M +++
Sbjct: 243 NYFSMGMDAQVSYAFHSERKLHPEKFKNQLSNQKTYLKLACTQGWFCASLCHPMSRNIAH 302
Query: 243 AVKLEV---DGR--PVELP-AVEGIIILNILSWGSGANPWG 347
K+++ G+ +E+P ++ I+ LN+ S+ G NPWG
Sbjct: 303 LSKVKIMKKSGKWETLEIPQSIRSIVCLNLPSFSGGLNPWG 343
>08_01_0530 -
4593665-4594006,4594169-4594285,4594417-4594504,
4594929-4595006,4595914-4595927,4595993-4596075,
4596359-4596407,4596535-4596658,4596936-4597021,
4597232-4597360,4597465-4597587,4597699-4597908
Length = 480
Score = 50.0 bits (114), Expect = 9e-07
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +3
Query: 78 NYFGIGIDADLCLDFHNAREENPNKFNSRLRNKGVYVKMGLRKMVGRKMCKDLHKA-VKL 254
NYF +G+DA++ FH+ R++NP KF ++L N+ + + ++ K+ K +L
Sbjct: 236 NYFSMGMDAEISYGFHSERKKNPEKFKNQLTNQ-ILNYSNIAQLASVKIMKRAGSHWQEL 294
Query: 255 EVDGRPVELPAVEGIIILNILSWGSGANPWG 347
+ ++ I+ LN+ S+ G NPWG
Sbjct: 295 NIH------HSIRSIVCLNLPSFSGGLNPWG 319
>02_05_1012 -
33495325-33495486,33495781-33495897,33496193-33496280,
33497878-33497948,33498382-33498464,33498939-33499008,
33499743-33499839,33500156-33500210,33500285-33500308,
33500417-33500504,33500764-33500886,33502026-33502379
Length = 443
Score = 48.4 bits (110), Expect = 3e-06
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Frame = +3
Query: 69 VMNNYFGIGIDADLCLDFHNAREENPNKFNSRLRNKGVYVKMGLRKMVGRKMCKDLHKAV 248
V NY IG+DA + FH+ R+E P + NK +Y G G C +
Sbjct: 263 VFYNYLSIGMDAQVAYGFHHLRDEKPYLAQGPVANKLIYA--GYSCTQGW-FCTPCTASP 319
Query: 249 KLEVDGRPVELPAVEGIIILNILSWGSGANPWGPEKDD-----XFNXPNHWDGMLDXXXX 413
+L +V +++LN+ ++GSG +PWG K D F + DG+L+
Sbjct: 320 QL----------SVRSLVVLNLYNYGSGRHPWGDLKPDYLEKKGFVEAHSDDGLLEIFGL 369
Query: 414 XXXXHLGXIQSGLLR 458
H + + L++
Sbjct: 370 KEGWHASFVMAELIK 384
>08_01_0927 -
9123473-9123589,9124534-9124616,9125177-9125252,
9125641-9125740,9125996-9126064,9126122-9126207,
9126293-9126430,9126688-9126810,9128130-9129719,
9129929-9130402
Length = 951
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 69 VMNNYFGIGIDADLCLDFHNAREENPNKFNSRLRNKGVY 185
V NYF IG+DA + FH+ R+E P + L NK +Y
Sbjct: 878 VFYNYFSIGMDAQVAYGFHHLRDEKPFLASGPLSNKLIY 916
>08_01_0926 - 9121926-9122090,9122376-9122492,9122640-9122741
Length = 127
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 285 AVEGIIILNILSWGSGANPWGPEKDD 362
+V I+ LN+ ++ SG NPWG K +
Sbjct: 5 SVRAIVALNLHNYASGRNPWGNLKPE 30
>08_01_1011 +
10226160-10226676,10226794-10226810,10227677-10227886,
10227921-10228406
Length = 409
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -2
Query: 129 RYGNRDISLHRCLSRNSCSLPGSA--SCPRSEILWSQMQDRPA 7
R G +D+SL L R C LPG A SC L + D PA
Sbjct: 3 RKGVQDLSLEFSLGRKPCRLPGPALFSCAALVRLDLEQCDMPA 45
>11_06_0209 +
21282079-21282369,21287029-21287137,21287462-21287580,
21287722-21287829,21287943-21288062,21288838-21289011,
21289111-21289212
Length = 340
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = -1
Query: 364 WSSFSGPHGFAPEPQLSMLSMMIPSTAGSSTGRPSTSSLTALCRSLHILRPTIL 203
W S G P L + +P ++T P+T S+ A + + PT++
Sbjct: 13 WRSVHSGSGATESPALGSAAAALPIAGFAATALPTTRSVVAKPPTAAVAEPTVV 66
>11_02_0117 +
8480350-8480424,8480958-8481223,8481254-8481374,
8481463-8481726,8482210-8482581
Length = 365
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 117 DFHNAREENPNKF--NSRLRNKGVYVKMGLRKMVGRKMCKDLHKAVKLEVD 263
DFH + ++ + NSR++ + + + + R+MC DLH + VD
Sbjct: 6 DFHMMKGDDKFSYAKNSRIQRRAILATRPMVEKAVREMCIDLHPQSMVIVD 56
>04_04_1577 +
34554819-34554995,34555672-34555754,34555906-34556229,
34556347-34556602,34556951-34557031,34557106-34557213,
34557300-34557329,34557475-34557612,34557737-34557774,
34557858-34557957,34558194-34558268
Length = 469
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 195 GLRKMVGRKMCKDLHKAVKLEVD 263
GLRK+ GRK KDL K V+ D
Sbjct: 291 GLRKLQGRKQLKDLVKKVQAARD 313
>03_06_0777 +
36181095-36181311,36181444-36181530,36181785-36182725,
36182956-36183006,36183240-36183328,36184975-36185078,
36185179-36185278,36185396-36185471,36185556-36185670,
36185755-36186286,36187032-36187527
Length = 935
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 232 ICTRRSNLKWTVDLWNCQLSRESSYLTY 315
+CTRR +W V NC LSR +S Y
Sbjct: 443 LCTRREYARWLVVASNC-LSRNTSSKVY 469
>03_04_0018 -
16484109-16484300,16484575-16484656,16484746-16484856,
16484937-16485188,16485274-16485677,16486035-16486952,
16486990-16487475,16487566-16487763
Length = 880
Score = 27.1 bits (57), Expect = 7.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 219 KMCKDLHKAVKLEVDGRPVELPAVE 293
K+ K+ + + L+ DG+PVE P V+
Sbjct: 114 KLPKETYNVIALDQDGKPVEPPIVQ 138
>12_02_1262 +
27415191-27415279,27415367-27415565,27415635-27415775,
27415939-27416003,27416111-27416489,27416688-27417149,
27417226-27417546,27418184-27418501
Length = 657
Score = 26.6 bits (56), Expect = 9.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 328 EPQLSMLSMMIPSTAGSSTGRPSTSSL 248
+ Q+S++ PS AGS TG+PS L
Sbjct: 508 DSQISLMGEGSPSIAGSLTGKPSDGYL 534
>08_01_0440 +
3875422-3875619,3875710-3876382,3876449-3877943,
3878029-3878280,3878361-3878471,3878561-3878642,
3878917-3879108
Length = 1000
Score = 26.6 bits (56), Expect = 9.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 219 KMCKDLHKAVKLEVDGRPVELPAV 290
K+ K+ + + L+ DG+P+E P V
Sbjct: 119 KLTKETYNVIALDQDGKPIEPPIV 142
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,342,458
Number of Sequences: 37544
Number of extensions: 252064
Number of successful extensions: 772
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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