Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_F23
(460 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30938| Best HMM Match : DAGK_acc (HMM E-Value=1.4013e-45) 99 9e-22
SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 2e-11
SB_58879| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_16731| Best HMM Match : Neocarzinostat (HMM E-Value=0.93) 52 2e-07
SB_23850| Best HMM Match : SMP (HMM E-Value=4.9) 38 0.004
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_47708| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_36989| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_34185| Best HMM Match : DegS (HMM E-Value=0.45) 27 5.6
SB_8759| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 27 5.6
SB_45703| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_52838| Best HMM Match : DUF1280 (HMM E-Value=2) 27 7.5
SB_39311| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_17842| Best HMM Match : RVT_1 (HMM E-Value=2.2e-29) 27 7.5
SB_59573| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_52945| Best HMM Match : RVT_1 (HMM E-Value=7.2e-19) 27 7.5
SB_42513| Best HMM Match : RVT_1 (HMM E-Value=2.2e-12) 27 7.5
SB_36068| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_17836| Best HMM Match : rve (HMM E-Value=7.3e-14) 27 7.5
SB_32444| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_32209| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 27 9.9
SB_13238| Best HMM Match : rve (HMM E-Value=1.1e-13) 27 9.9
SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14) 27 9.9
SB_19376| Best HMM Match : RVT_1 (HMM E-Value=6.7e-16) 27 9.9
>SB_30938| Best HMM Match : DAGK_acc (HMM E-Value=1.4013e-45)
Length = 709
Score = 99 bits (238), Expect = 9e-22
Identities = 48/103 (46%), Positives = 69/103 (66%)
Frame = +3
Query: 39 SQSEDNSQILVMNNYFGIGIDADLCLDFHNAREENPNKFNSRLRNKGVYVKMGLRKMVGR 218
S++ D+ + ++NNYF IG+DA + L FH RE+NP KFNSRL+NK Y + G + +
Sbjct: 453 SENGDSPPLNIINNYFSIGVDASVALKFHLQREKNPEKFNSRLKNKFRYFECGTSETLS- 511
Query: 219 KMCKDLHKAVKLEVDGRPVELPAVEGIIILNILSWGSGANPWG 347
CK+L A+++ DG+ +ELP +EGI I+NI S GAN WG
Sbjct: 512 ATCKNLQDAIQVICDGKILELPNLEGIAIVNIPSVYGGANLWG 554
>SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1263
Score = 65.3 bits (152), Expect = 2e-11
Identities = 32/52 (61%), Positives = 35/52 (67%)
Frame = +3
Query: 27 VTTGSQSEDNSQILVMNNYFGIGIDADLCLDFHNAREENPNKFNSRLRNKGV 182
+T G + E N + VMNNY GIGIDADLCLDFH REE P KF SR R V
Sbjct: 1160 LTAGREEEPN--MFVMNNYLGIGIDADLCLDFHLRREEAPEKFTSRWREFNV 1209
>SB_58879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1786
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +3
Query: 57 SQILVMNNYFGIGIDADLCLDFHNAREENPNKFNS 161
S+ VMNNYFGIGIDA + LDFH REE+P K+++
Sbjct: 1395 SEKCVMNNYFGIGIDAKITLDFHTRREEHPEKYSA 1429
>SB_16731| Best HMM Match : Neocarzinostat (HMM E-Value=0.93)
Length = 215
Score = 52.4 bits (120), Expect = 2e-07
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = +3
Query: 57 SQILVMNNYFGIGIDADLCLDFHNAREENPNKF 155
S+ VMNNYFGIGIDA + LDFH REE+P K+
Sbjct: 182 SEKCVMNNYFGIGIDAKITLDFHTRREEHPEKY 214
>SB_23850| Best HMM Match : SMP (HMM E-Value=4.9)
Length = 163
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 252 LEVDGRPVELPAVEGIIILNILSW 323
LE+D + VELP +EGI+ILNI SW
Sbjct: 14 LELDDKKVELPDLEGIVILNISSW 37
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 14 RSCICDHRISERGQLADPGNEQLFRDRH 97
R +C++ +SER +L PG E+ F D H
Sbjct: 975 RPLVCEN-VSERARLVAPGLERWFDDEH 1001
>SB_47708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 340 GFAPEPQLSMLSMMIPSTAGSSTGRPSTSSLTALCRSLHI 221
GF P ++MLS M + + S + T LC S HI
Sbjct: 70 GFFPTITINMLSCMTQNISLLSENETRLDNFTLLCNSTHI 109
>SB_36989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 989
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/65 (21%), Positives = 34/65 (52%)
Frame = +3
Query: 60 QILVMNNYFGIGIDADLCLDFHNAREENPNKFNSRLRNKGVYVKMGLRKMVGRKMCKDLH 239
+I+ +N Y G+ + A+ ++ A++E L+N + + L++ +G+ C D+
Sbjct: 463 EIVTVNKYLGLTLSANG--RYNTAKQE--------LKNSALKALLSLKRNIGKNFCSDMS 512
Query: 240 KAVKL 254
++L
Sbjct: 513 LTIRL 517
>SB_34185| Best HMM Match : DegS (HMM E-Value=0.45)
Length = 348
Score = 27.5 bits (58), Expect = 5.6
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 216 RKMCKDLHKAVKLEVDGRPVELPAVEGIIILNILSWGSGANPWGPEKD 359
R CK++ ++ +V +P E A E N L +G G PW KD
Sbjct: 298 RMSCKEVETKLE-QVRPQPPEGEANEHCARKNKLGFGGGRLPWASNKD 344
>SB_8759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -1
Query: 361 SSFSGPHGFAPEPQLSMLSMMIPSTAGSSTGRPSTSSLTALCRSLHILRPTI 206
S+F P +AP+P LS +T + SSL+++ + PT+
Sbjct: 423 SNFQPPPAYAPQPPTRPLSGATSGIGSDTTSQLGCSSLSSVSSQSCLSSPTV 474
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 71 NEQLFRDRHRCRLMSRFP*RTRGKPEQVQQQAEKQRCLREDGL 199
N+ F C+++S F R E+V++Q +K+ LRE L
Sbjct: 1234 NKSRFSVNEFCKIISEFSLEYRTTRERVREQKKKREKLRERNL 1276
>SB_45703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.5 bits (58), Expect = 5.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 108 SLHRCLSRNSCSLPGSASCPRSE 40
++ RC +++CS PG C RS+
Sbjct: 164 NIGRCSRKSTCSYPGGMKCKRSK 186
>SB_52838| Best HMM Match : DUF1280 (HMM E-Value=2)
Length = 280
Score = 27.1 bits (57), Expect = 7.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 274 WNCQLSRESSYLTYLVGV 327
W+C+L ESSY+T + V
Sbjct: 241 WHCELDEESSYMTTFITV 258
>SB_39311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 916
Score = 27.1 bits (57), Expect = 7.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 274 WNCQLSRESSYLTYLVGV 327
W+C+L ESSY+T + V
Sbjct: 59 WHCELDEESSYMTTFITV 76
>SB_17842| Best HMM Match : RVT_1 (HMM E-Value=2.2e-29)
Length = 1167
Score = 27.1 bits (57), Expect = 7.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 274 WNCQLSRESSYLTYLVGV 327
W+C+L ESSY+T + V
Sbjct: 518 WHCELDEESSYMTTFITV 535
>SB_59573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 27.1 bits (57), Expect = 7.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 274 WNCQLSRESSYLTYLVGV 327
W+C+L ESSY+T + V
Sbjct: 200 WHCELDEESSYMTTFITV 217
>SB_52945| Best HMM Match : RVT_1 (HMM E-Value=7.2e-19)
Length = 429
Score = 27.1 bits (57), Expect = 7.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 274 WNCQLSRESSYLTYLVGV 327
W+C+L ESSY+T + V
Sbjct: 57 WHCELDEESSYMTTFITV 74
>SB_42513| Best HMM Match : RVT_1 (HMM E-Value=2.2e-12)
Length = 519
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/65 (21%), Positives = 34/65 (52%)
Frame = +3
Query: 60 QILVMNNYFGIGIDADLCLDFHNAREENPNKFNSRLRNKGVYVKMGLRKMVGRKMCKDLH 239
+I+ +N Y G+ + A+ ++ A++E L+N + + L++ +G+ C D+
Sbjct: 432 EIVTVNKYLGLTLSANG--RYNTAKQE--------LKNSALKALLSLKRYLGKNFCSDIS 481
Query: 240 KAVKL 254
++L
Sbjct: 482 LTIRL 486
>SB_36068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 132 REENPNKFNSRLRNKGVYVKMGLRKMVGRKMCKDLHKAVKLEVDGRPVELPAVEGIIILN 311
R F RL++ Y K+ + + G + K LH+ KL V L + G LN
Sbjct: 90 RLREAKSFTERLKSSHGYQKLNV--LSGYERLKFLHRYQKLNVSSGYQRLKSSHGYQKLN 147
Query: 312 ILS 320
+LS
Sbjct: 148 VLS 150
>SB_17836| Best HMM Match : rve (HMM E-Value=7.3e-14)
Length = 713
Score = 27.1 bits (57), Expect = 7.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 274 WNCQLSRESSYLTYLVGV 327
W+C+L ESSY+T + V
Sbjct: 11 WHCELDEESSYMTTFITV 28
>SB_32444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 836
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -2
Query: 171 FSACC*TCSGFPRVRYGNRDISLHRCLSRNSCSLPGSASCPRSEILWSQMQ 19
+SAC C+G P RY + + R ++P S RSEI WS M+
Sbjct: 725 WSACSKNCAGGPVPRY--KPLGCFR--DGRPFAIPVLVSSVRSEIDWSNMK 771
>SB_32209| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 1240
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 63 ILVMNNYFGIGIDADLCLDFHNAREENPNKFNSRLRNK 176
I+VM + +G+D D DFH+ + +PN + RN+
Sbjct: 513 IVVMIMKWSVGVDDD---DFHDIDDSDPNDNDDGYRNR 547
>SB_13238| Best HMM Match : rve (HMM E-Value=1.1e-13)
Length = 637
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 274 WNCQLSRESSYLTYLVGV 327
W+C+L ESSY+T + V
Sbjct: 103 WHCKLDEESSYMTTFITV 120
>SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14)
Length = 384
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 53 QLADPGNEQLFRDRHRCR 106
++ D EQ+ RDRHRC+
Sbjct: 313 EMGDLSYEQMVRDRHRCK 330
>SB_19376| Best HMM Match : RVT_1 (HMM E-Value=6.7e-16)
Length = 274
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 274 WNCQLSRESSYLTYLVGV 327
W+C+L ESSY+T + V
Sbjct: 105 WHCKLDEESSYMTTFITV 122
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,014,102
Number of Sequences: 59808
Number of extensions: 274807
Number of successful extensions: 847
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 932979724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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