Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_F21
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    25   0.79 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   3.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   9.7  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -2

Query: 701 DIHPFLATKFRSAGVXKTATALPAVSTKEPAMYPYVVFIR 582
           DI+P L T    A        L   S K+P MY  VV +R
Sbjct: 545 DINPSLCTHIIYAFATLKDHKLAEASDKDPEMYDRVVALR 584


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +3

Query: 348 KLCGQKLCTRTSNKGRYTLTTHTSGETH 431
           KLCG K+  +     R      TS  TH
Sbjct: 366 KLCGMKIVKKRRKDKREITRKSTSSSTH 393


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 281 IHIRDNIINSENVYYYSDFR*LYFHELLRIHK 186
           + + DNI+     +YY   + L  HE+  I K
Sbjct: 120 LFLLDNIVKPIIAFYYKPIKTLNGHEIKFIRK 151


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 85  YCRLGSYYHLKFM 47
           + +LGS YH+ FM
Sbjct: 336 HVKLGSLYHISFM 348


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = +1

Query: 58  NDNTNQDDNKLISNNSSC 111
           + ++N  +N +++NNS+C
Sbjct: 385 DQSSNSRNNYVLTNNSTC 402


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,120
Number of Sequences: 336
Number of extensions: 3726
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)