Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_F21
         (702 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88168-4|AAC24402.1|  342|Caenorhabditis elegans Hypothetical pr...    77   9e-15
Z81118-9|CAM84694.1|  208|Caenorhabditis elegans Hypothetical pr...    33   0.20 
AL033514-37|CAA22087.2|  441|Caenorhabditis elegans Hypothetical...    29   2.4  
U21323-2|AAM22051.1|  155|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U21323-1|AAM22050.1|  542|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha...    29   4.3  
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha...    29   4.3  
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr...    28   5.6  
U21324-19|AAK68224.1|  407|Caenorhabditis elegans C-type lectin ...    28   5.6  
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ...    28   5.6  
AF016445-6|AAC69053.1|  250|Caenorhabditis elegans Hypothetical ...    28   5.6  
AF016445-4|AAC69058.1|  312|Caenorhabditis elegans Hypothetical ...    27   9.8  
AF016420-6|AAB65311.3|  530|Caenorhabditis elegans Udp-glucurono...    27   9.8  

>U88168-4|AAC24402.1|  342|Caenorhabditis elegans Hypothetical
           protein K11H12.8a protein.
          Length = 342

 Score = 77.4 bits (182), Expect = 9e-15
 Identities = 43/102 (42%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
 Frame = +1

Query: 400 RSQPTLRERLMAPAGPNAFXXXXXXXXXXXXXXXXXXCYYGSGVKPGT-LQESHLWPQYV 576
           R+ PTL+ERL+ P     F                   YYG   K  + LQ+S +WP YV
Sbjct: 50  RTGPTLKERLLGPTTGKPFVYGTYALAGASVFGVGALMYYGLVSKEQSILQKSAIWPSYV 109

Query: 577 KERIKTTYGYIAGSLVLTAGSAVAVFXTPALLNLVARNGWMS 702
           +ERI TTY Y+AGSL LTA S VA   + A++ L A  G MS
Sbjct: 110 RERISTTYAYLAGSLALTAVSGVAASRSAAIMRLTAGGGMMS 151


>Z81118-9|CAM84694.1|  208|Caenorhabditis elegans Hypothetical
           protein T10G3.8 protein.
          Length = 208

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 334 NFVPRNYVVRNYAREPRTRVATRSQPTLRERLMAP 438
           + VP+N V +N + +PR RV TR  P+   +L  P
Sbjct: 119 SLVPKNEVKKNASPQPRVRVITRKSPSPLRKLSTP 153


>AL033514-37|CAA22087.2|  441|Caenorhabditis elegans Hypothetical
           protein Y75B8A.27 protein.
          Length = 441

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 199 CVFTNIWYQCKSSILTYV 146
           C  TN+W QC +S+L YV
Sbjct: 379 CTITNLWTQCWNSLLPYV 396


>U21323-2|AAM22051.1|  155|Caenorhabditis elegans Hypothetical
           protein C45G9.6b protein.
          Length = 155

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 276 VYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKG 392
           V R  G  CN+ +   S   +CT  + G K+C  TSN G
Sbjct: 58  VQRDEGGYCNSNTDCRSGL-YCTASVNGVKICLSTSNGG 95


>U21323-1|AAM22050.1|  542|Caenorhabditis elegans Hypothetical
           protein C45G9.6a protein.
          Length = 542

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 276 VYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKG 392
           V R  G  CN+ +   S   +CT  + G K+C  TSN G
Sbjct: 58  VQRDEGGYCNSNTDCRSGL-YCTASVNGVKICLSTSNGG 95


>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
            K08C7.3b protein.
          Length = 3672

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -1

Query: 702  GHPSISCYQI*KCGCXENSNCTTS-SQHQRTRDVSIC 595
            GHP IS      C C  N+N T S S H  + D  +C
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961


>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
            K08C7.3a protein.
          Length = 3704

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -1

Query: 702  GHPSISCYQI*KCGCXENSNCTTS-SQHQRTRDVSIC 595
            GHP IS      C C  N+N T S S H  + D  +C
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961


>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
            chain protein.
          Length = 3704

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -1

Query: 702  GHPSISCYQI*KCGCXENSNCTTS-SQHQRTRDVSIC 595
            GHP IS      C C  N+N T S S H  + D  +C
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961


>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
            protein.
          Length = 3704

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -1

Query: 702  GHPSISCYQI*KCGCXENSNCTTS-SQHQRTRDVSIC 595
            GHP IS      C C  N+N T S S H  + D  +C
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961


>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
            F40E10.4 protein.
          Length = 1410

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 240  IDVFRINYVITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRT--SNKG-RYTLTT 410
            I    IN V  N+ ++L    N E   ++T  FC    CG   CT    S KG      +
Sbjct: 1260 ISSITINEVPINLQQALE-NVNTEQSCSATVNFCAGIDCGNGKCTNNALSPKGYMCQCDS 1318

Query: 411  HTSGE 425
            H SGE
Sbjct: 1319 HFSGE 1323


>U21324-19|AAK68224.1|  407|Caenorhabditis elegans C-type lectin
           protein 6 protein.
          Length = 407

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 492 SWTSCSVLLWLWGKTRYSSGISP 560
           SW S SVL WL G T   + ISP
Sbjct: 219 SWPSTSVLTWLDGSTSDYNNISP 241


>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
            protein F40E10.4 protein.
          Length = 1410

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 240  IDVFRINYVITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRT--SNKG-RYTLTT 410
            I    IN V  N+ ++L    N E   ++T  FC    CG   CT    S KG      +
Sbjct: 1260 ISSITINEVPINLQQALE-NVNTEQSCSATVNFCAGIDCGNGKCTNNALSPKGYMCQCDS 1318

Query: 411  HTSGE 425
            H SGE
Sbjct: 1319 HFSGE 1323


>AF016445-6|AAC69053.1|  250|Caenorhabditis elegans Hypothetical
           protein T05B4.10 protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 19/73 (26%), Positives = 30/73 (41%)
 Frame = +3

Query: 267 ITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKGRYTLTTHTSGETHGTCWT 446
           +TN    L + CN          +C ++ CG+  C  T+  G  T+T+       GTC +
Sbjct: 163 VTNCGNDLSI-CNTVGMQTFVNTYC-QRTCGR--CPSTTASGSVTVTS-------GTCTS 211

Query: 447 KCIQLGQGCISWS 485
                   C +WS
Sbjct: 212 YIADSSSNCAAWS 224


>AF016445-4|AAC69058.1|  312|Caenorhabditis elegans Hypothetical
           protein T05B4.8 protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = +3

Query: 369 CTRTSNKGRYTLTTHTSGETHGTCWTKCIQLGQGCISWSLCSWTSCSVLLWLWGK 533
           C RT  +   T T+ +   T GTC +        C SW+  +   C VL  L  K
Sbjct: 9   CQRTCGRCPSTTTSGSVTVTSGTCTSYIADSSSNCASWARTT-RFCVVLSLLLNK 62


>AF016420-6|AAB65311.3|  530|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein7 protein.
          Length = 530

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -3

Query: 124 FSL*YSLNYCLLIYCRLGSYYHLKFMLLADV*QNLADH 11
           F L YS  +  LI   + SY H+KFM  +++   LADH
Sbjct: 8   FFLQYSYAFKYLIISPIYSYSHVKFM--SNIADTLADH 43


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,460,727
Number of Sequences: 27780
Number of extensions: 319095
Number of successful extensions: 930
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)