Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_F15
         (740 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding pr...    24   5.7  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   9.9  

>AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP29 protein.
          Length = 176

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +1

Query: 379 HIVVLSKRRSQLKQAVVKMVQECYTYVDKTPDKETKIKLIETLRTIT 519
           H++    R  +L++  V  +QEC+  +    D   K K   ++R +T
Sbjct: 111 HVITKDIREHELREFYVDSIQECFHMLGL--DNRLKDKCDYSMRFVT 155


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
 Frame = +1

Query: 466 TPDKETKIKLIETLRTITEGKIYVEV-----ERARLTHILAKIREEEGNVAEAAKIIQE 627
           T +K T+   + TL  +     +  +     E  RL     KIR + G +  + K +QE
Sbjct: 589 TGEKSTRSDALRTLNLLNRSTDHALLAQKRQEHQRLVRECDKIRNQRGQIENSIKELQE 647


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,142
Number of Sequences: 2352
Number of extensions: 12399
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)