Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_F11
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.99 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.9  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   6.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   6.9  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +2

Query: 128 PLICWSSCRGRC-WREMSGTWSAPRAPSGHS 217
           PL C      RC  RE S +   PR PSG S
Sbjct: 73  PLNCRDLPNSRCNSRESSDSLVQPRCPSGES 103


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +2

Query: 182 TWSAPRAPSGHSPPTTTRPSCCCAVL 259
           +WS  R  +G   P    PS C  ++
Sbjct: 530 SWSQKRPGAGKFTPEDINPSLCTHII 555


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 459 KFQTFQIKIRFLFPCY 412
           KFQT +++  FLF  Y
Sbjct: 252 KFQTLELEKEFLFNAY 267


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 256 HCATTTWPC 230
           HC  TTW C
Sbjct: 155 HCNNTTWRC 163


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 4/9 (44%), Positives = 9/9 (100%)
 Frame = +3

Query: 555 YLVMIVFWY 581
           Y+++++FWY
Sbjct: 260 YIIVVIFWY 268


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 4/9 (44%), Positives = 9/9 (100%)
 Frame = +3

Query: 555 YLVMIVFWY 581
           Y+++++FWY
Sbjct: 260 YIIVVIFWY 268


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +3

Query: 339 TADLHQHRLTSHVIINTNFIHSFYNNREKE 428
           TA+ H H  +SH     N+  ++Y   + +
Sbjct: 287 TANGHGHNTSSHNYYAQNYAPTYYGQMQPD 316


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,834
Number of Sequences: 336
Number of extensions: 2077
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)