Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_F11
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    24   5.0  
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       23   8.8  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   8.8  

>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +2

Query: 287 CSGCSDTSPMPPLCERCNC*PTP-TPSYKPRDNKYKLHT 400
           CSG S +SP P L     C PT   P  +P   +  L T
Sbjct: 136 CSGSSSSSPEPNLDCLSKCSPTKCVPFCRPFSGQTALLT 174


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = +1

Query: 259 GIPAAVHSAL---QRLQRHQSDAASMRALQLLTYTNTV 363
           G+P  VH+A+   QRL +   D   ++AL  +    T+
Sbjct: 79  GLPEDVHAAIEQQQRLAQQLHDGQHLKALSFVLVEETL 116


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -1

Query: 216 ECPDGARGADHVPDISRQQRPRQELQQIRGLQKSNAMIM 100
           ECP+  +  D V  I+   R  +E  +++   K  AM++
Sbjct: 618 ECPELTKAMDGVTYIADHTRKEEESSRVKEDWKYVAMVL 656


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,128
Number of Sequences: 2352
Number of extensions: 8793
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)