Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_F09
(859 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1064 + 23700662-23700787,23701709-23701870,23701983-237021... 207 1e-53
07_03_1492 + 26960876-26960986,26961910-26962074,26962153-269622... 192 2e-49
03_01_0512 - 3849275-3849333,3849429-3849531,3849610-3849654,384... 168 6e-42
03_03_0021 + 13808274-13808384,13809036-13809200,13809249-138092... 91 1e-18
04_03_0176 - 12273045-12273115,12273214-12273413,12273617-122737... 30 2.1
04_03_0695 + 18790491-18790565,18791299-18791427,18792981-18794189 29 6.3
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 28 8.3
04_04_0537 + 26079926-26079994,26080317-26080500,26081866-260839... 28 8.3
>07_03_1064 +
23700662-23700787,23701709-23701870,23701983-23702101,
23703128-23703202,23704387-23704480,23704856-23704915,
23705083-23705151,23705457-23705555,23706201-23706245,
23706339-23706441,23706665-23706723
Length = 336
Score = 207 bits (505), Expect = 1e-53
Identities = 105/251 (41%), Positives = 161/251 (64%), Gaps = 7/251 (2%)
Frame = +2
Query: 128 LFGKSQKSPAELVRSLKDAVTALER------GDKKAEKAQEDVSKNLVLIKNMLYGTSDA 289
LF ++PA++VR ++ + L+ GD K E+ ++SKN+ +K++LYG ++
Sbjct: 4 LFKSKPRTPADVVRQTRELLIFLDLHSGSRGGDAKREEKMAELSKNIRELKSILYGNGES 63
Query: 290 EPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEY 469
EP T+ V QL QE + +++ E +KD QV N+ R+Q+ ++ EY
Sbjct: 64 EPVTEACV-QLTQEFFRENTLRLLIICLPKLNLETRKDATQVVANLQRQQVSSKIVASEY 122
Query: 470 ICTKPEILFTLMSGYEHQEIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFD 649
+ ++L TL+SGYE+ +IA + G+MLREC R++++A+ +L SD FF Y+++ FD
Sbjct: 123 LEANKDLLDTLISGYENMDIALHYGSMLRECIRHQSIARYVLESDHMKKFFDYIQLPNFD 182
Query: 650 IASDAFSTFKELLTRHKILCAEFLXANYDKVFSHYQ-RLLNSENYVTRRQSLKLLGELLL 826
IASDA +TFKELLTRHK AEFL NYD FS + RLL+S NY+T+RQ++K LG++LL
Sbjct: 183 IASDASATFKELLTRHKATVAEFLSKNYDWFFSEFNTRLLSSTNYITKRQAIKFLGDMLL 242
Query: 827 DRHNFSIMTRY 859
DR N ++M RY
Sbjct: 243 DRSNSTVMMRY 253
>07_03_1492 +
26960876-26960986,26961910-26962074,26962153-26962271,
26962559-26962633,26963063-26963156,26963239-26963298,
26963474-26963539,26963622-26963720,26964027-26964035
Length = 265
Score = 192 bits (469), Expect = 2e-49
Identities = 102/240 (42%), Positives = 151/240 (62%)
Frame = +2
Query: 140 SQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAEPQTDIIVAQ 319
++ SP ELVRS+K+++ AL+ + KA EDV KN+ ++ L G + EP + ++ Q
Sbjct: 12 ARPSPQELVRSIKESLLALDT--RTGAKALEDVEKNVSTLRQTLSGDGEVEPNQEQVL-Q 68
Query: 320 LAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEYICTKPEILFT 499
+A E+ + +EG+KD+A ++ +LR+++ V+YI ++L
Sbjct: 69 IALEICKEDVLSLFVQNMPSLGWEGRKDLAHCWSILLRQKVDEAYCCVQYIENHFDLLDF 128
Query: 500 LMSGYEHQEIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFDIASDAFSTFK 679
L+ Y++ E+A NCG MLREC +Y LAK +L S F FF+YVE+S FDIASDA +TFK
Sbjct: 129 LVVCYKNLEVALNCGNMLRECIKYPTLAKYILESSSFELFFQYVELSNFDIASDALNTFK 188
Query: 680 ELLTRHKILCAEFLXANYDKVFSHYQRLLNSENYVTRRQSLKLLGELLLDRHNFSIMTRY 859
+LLT+H+ +EFL ++Y++ F Y RLL S NYVTRRQS+K L E LL+ N IM RY
Sbjct: 189 DLLTKHEAAVSEFLCSHYEQFFELYTRLLTSTNYVTRRQSVKFLSEFLLEAPNAQIMKRY 248
>03_01_0512 -
3849275-3849333,3849429-3849531,3849610-3849654,
3849876-3849974,3850078-3850146,3850251-3850310,
3850540-3850633,3850875-3850949,3851101-3851219,
3851433-3851600,3852743-3852928
Length = 358
Score = 168 bits (408), Expect = 6e-42
Identities = 95/255 (37%), Positives = 146/255 (57%), Gaps = 11/255 (4%)
Frame = +2
Query: 128 LFGKSQKSPAELVRSLKDAVTALER-----GDK---KAEKAQEDVSKNLVLIKNMLYGTS 283
LF + P E+VR ++ + L GDK K E D++K++ +K++LYG
Sbjct: 22 LFRSKARGPVEVVRHARELLAFLAENHDACGDKRDVKREHKMVDLAKSIGEMKSILYGNG 81
Query: 284 DAEPQTDIIVAQLAQEMYXXXXXXXXXXXXXR--IDFEGKKDVAQVFNNVLRRQIGTRSP 457
+A+P D +QL +E + +D E +KDV QV N+LR+++ R
Sbjct: 82 EADP-VDEACSQLTKEFFKENTNSLHLLVVCLPYMDLETQKDVTQVTANLLRQKVDYRMV 140
Query: 458 TVEYICTKPEILFTLMSGYEHQEIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEV 637
+Y+ ++L LMSGY++ +IA + +LR+C R++ A+ +L S FF Y++
Sbjct: 141 ASDYLEENQDLLDVLMSGYDNMDIAIHYSAILRDCIRHQVAARYVLESQHMKKFFDYIQY 200
Query: 638 STFDIASDAFSTFKELLTRHKILCAEFLXANYDKVFSHY-QRLLNSENYVTRRQSLKLLG 814
F+IASDAF TFKELLTRH+ AEF NYD F + +LL+S NY+ RRQ+ +LLG
Sbjct: 201 PDFNIASDAFKTFKELLTRHRSSAAEFFSNNYDWFFPEFNSKLLSSSNYIIRRQATQLLG 260
Query: 815 ELLLDRHNFSIMTRY 859
++LLD+ N + M RY
Sbjct: 261 DILLDKSNTTAMVRY 275
>03_03_0021 +
13808274-13808384,13809036-13809200,13809249-13809278,
13809279-13809397,13809696-13809770,13812071-13812146,
13813224-13813289,13813364-13813462,13814072-13814174,
13814338-13814411
Length = 305
Score = 91.1 bits (216), Expect = 1e-18
Identities = 74/246 (30%), Positives = 113/246 (45%), Gaps = 9/246 (3%)
Frame = +2
Query: 149 SPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAEPQTDIIVA---Q 319
+P E+VRS+KD+ AL K +A E+V KNL ++ ML G +AEP + ++ +
Sbjct: 15 TPEEVVRSIKDSFQALHT--KNGARALEEVEKNLSSLRQMLSGDGEAEPNQEQVLQITLE 72
Query: 320 LAQE------MYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEYICTK 481
+ +E + + + +KD+ + +LR++ V+YI
Sbjct: 73 ICKEDVLSLFVQNLPSLGWGPVEIVSSELQVRKDLVHCWCILLRQKFDESYCCVKYIENH 132
Query: 482 PEILFTLMSGYEHQEIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFDIASD 661
E+L L+ Y++ ++A NCG MLREC +Y L K+ + D+A
Sbjct: 133 LELLDFLVGCYKNLDVALNCGNMLRECIKYPTLTKVRIE----------------DVA-- 174
Query: 662 AFSTFKELLTRHKILCAEFLXANYDKVFSHYQRLLNSENYVTRRQSLKLLGELLLDRHNF 841
+ R + A F Y RLL S NYVTRRQS+K L E LL+ N
Sbjct: 175 --------VERSLVAAASGARRQMTAFFELYTRLLTSPNYVTRRQSVKFLSEFLLEAPNA 226
Query: 842 SIMTRY 859
IM RY
Sbjct: 227 RIMKRY 232
>04_03_0176 -
12273045-12273115,12273214-12273413,12273617-12273714,
12274573-12274629,12274710-12274846,12275085-12275142,
12275620-12275718,12275827-12275885,12278554-12278624,
12280763-12281019
Length = 368
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 710 AEFLXANYDKVFSHYQRLLNSENYVTRRQSLKLLGEL 820
+EFL +N K H + +L S YV RR+ ++L+ EL
Sbjct: 219 SEFLSSNAIKFIDHLEEILQS--YVDRREQVRLIKEL 253
>04_03_0695 + 18790491-18790565,18791299-18791427,18792981-18794189
Length = 470
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 134 GKSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIK 262
G+ +K EL+R + + +E K+ EKAQE++ K +++
Sbjct: 224 GRVEKICTELIRGIGEDKAEVEALKKETEKAQEELQKEREMLQ 266
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 166 NKLRRAFLRLTKERHSIKATWAGDISNYVYIRLYFWINYC 47
NKLR A LTK+ ++ ++ VY+R W+N C
Sbjct: 289 NKLRHANEDLTKQVEGLQMNRFSEVEELVYLR---WVNAC 325
>04_04_0537 + 26079926-26079994,26080317-26080500,26081866-26083910,
26084323-26084424,26084566-26084622
Length = 818
Score = 28.3 bits (60), Expect = 8.3
Identities = 27/102 (26%), Positives = 43/102 (42%)
Frame = +2
Query: 530 ASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFDIASDAFSTFKELLTRHKILC 709
++ +ML E ++ ++ ++ F F E T + A +LL L
Sbjct: 719 STGSNSMLAEQDHFDLQMALVSFTG-FQEVFMNFEAVTCEKLETAMLRLVDLLGDEVELL 777
Query: 710 AEFLXANYDKVFSHYQRLLNSENYVTRRQSLKLLGELLLDRH 835
L Y K Y +L E+Y+ R+ LKLLG+ L RH
Sbjct: 778 LGLLRKTY-KALDRYSPVL--EHYLGVREMLKLLGKELALRH 816
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,756,647
Number of Sequences: 37544
Number of extensions: 366942
Number of successful extensions: 947
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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