BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_F09
(859 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020570-1|AAH20570.1| 341|Homo sapiens calcium binding protein... 348 1e-95
AF151824-1|AAD34061.1| 341|Homo sapiens CGI-66 protein protein. 348 1e-95
AF113536-1|AAF14873.1| 341|Homo sapiens MO25 protein protein. 348 1e-95
AF134480-1|AAP97257.1| 341|Homo sapiens MO25-like protein protein. 338 1e-92
AL138875-4|CAI10893.1| 337|Homo sapiens calcium binding protein... 329 9e-90
AL136218-3|CAI10816.1| 337|Homo sapiens calcium binding protein... 329 9e-90
BC010993-1|AAH10993.2| 337|Homo sapiens calcium binding protein... 326 8e-89
AK022639-1|BAB14147.1| 289|Homo sapiens protein ( Homo sapiens ... 274 2e-73
AL138875-3|CAI10892.1| 280|Homo sapiens calcium binding protein... 238 2e-62
AL136218-1|CAI10814.1| 280|Homo sapiens calcium binding protein... 238 2e-62
AL136218-2|CAI10815.1| 132|Homo sapiens calcium binding protein... 152 1e-36
AC084031-1|AAY14829.1| 38|Homo sapiens unknown protein. 41 0.005
>BC020570-1|AAH20570.1| 341|Homo sapiens calcium binding protein 39
protein.
Length = 341
Score = 348 bits (856), Expect = 1e-95
Identities = 168/250 (67%), Positives = 205/250 (82%), Gaps = 4/250 (1%)
Frame = +2
Query: 122 MPL-FGKSQKSPAELVRSLKDAVTALER---GDKKAEKAQEDVSKNLVLIKNMLYGTSDA 289
MP FGKS KSPA++V++LK+++ LE+ DKKAEKA E+VSKNLV +K +LYGT++
Sbjct: 1 MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK 60
Query: 290 EPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEY 469
EPQT+ VAQLAQE+Y IDFEGKKDVAQ+FNN+LRRQIGTR+PTVEY
Sbjct: 61 EPQTEA-VAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEY 119
Query: 470 ICTKPEILFTLMSGYEHQEIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFD 649
ICT+ ILF L+ GYE EIA NCG MLREC R+E LAKI+L+S+ FY+FFRYVE+STFD
Sbjct: 120 ICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFD 179
Query: 650 IASDAFSTFKELLTRHKILCAEFLXANYDKVFSHYQRLLNSENYVTRRQSLKLLGELLLD 829
IASDAF+TFK+LLTRHK+L AEFL +YD+ FS Y++LL+SENYVT+RQSLKLLGELLLD
Sbjct: 180 IASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLD 239
Query: 830 RHNFSIMTRY 859
RHNF+IMT+Y
Sbjct: 240 RHNFTIMTKY 249
>AF151824-1|AAD34061.1| 341|Homo sapiens CGI-66 protein protein.
Length = 341
Score = 348 bits (856), Expect = 1e-95
Identities = 168/250 (67%), Positives = 205/250 (82%), Gaps = 4/250 (1%)
Frame = +2
Query: 122 MPL-FGKSQKSPAELVRSLKDAVTALER---GDKKAEKAQEDVSKNLVLIKNMLYGTSDA 289
MP FGKS KSPA++V++LK+++ LE+ DKKAEKA E+VSKNLV +K +LYGT++
Sbjct: 1 MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK 60
Query: 290 EPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEY 469
EPQT+ VAQLAQE+Y IDFEGKKDVAQ+FNN+LRRQIGTR+PTVEY
Sbjct: 61 EPQTEA-VAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEY 119
Query: 470 ICTKPEILFTLMSGYEHQEIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFD 649
ICT+ ILF L+ GYE EIA NCG MLREC R+E LAKI+L+S+ FY+FFRYVE+STFD
Sbjct: 120 ICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFD 179
Query: 650 IASDAFSTFKELLTRHKILCAEFLXANYDKVFSHYQRLLNSENYVTRRQSLKLLGELLLD 829
IASDAF+TFK+LLTRHK+L AEFL +YD+ FS Y++LL+SENYVT+RQSLKLLGELLLD
Sbjct: 180 IASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLD 239
Query: 830 RHNFSIMTRY 859
RHNF+IMT+Y
Sbjct: 240 RHNFTIMTKY 249
>AF113536-1|AAF14873.1| 341|Homo sapiens MO25 protein protein.
Length = 341
Score = 348 bits (856), Expect = 1e-95
Identities = 168/250 (67%), Positives = 205/250 (82%), Gaps = 4/250 (1%)
Frame = +2
Query: 122 MPL-FGKSQKSPAELVRSLKDAVTALER---GDKKAEKAQEDVSKNLVLIKNMLYGTSDA 289
MP FGKS KSPA++V++LK+++ LE+ DKKAEKA E+VSKNLV +K +LYGT++
Sbjct: 1 MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK 60
Query: 290 EPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEY 469
EPQT+ VAQLAQE+Y IDFEGKKDVAQ+FNN+LRRQIGTR+PTVEY
Sbjct: 61 EPQTEA-VAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEY 119
Query: 470 ICTKPEILFTLMSGYEHQEIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFD 649
ICT+ ILF L+ GYE EIA NCG MLREC R+E LAKI+L+S+ FY+FFRYVE+STFD
Sbjct: 120 ICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFD 179
Query: 650 IASDAFSTFKELLTRHKILCAEFLXANYDKVFSHYQRLLNSENYVTRRQSLKLLGELLLD 829
IASDAF+TFK+LLTRHK+L AEFL +YD+ FS Y++LL+SENYVT+RQSLKLLGELLLD
Sbjct: 180 IASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLD 239
Query: 830 RHNFSIMTRY 859
RHNF+IMT+Y
Sbjct: 240 RHNFTIMTKY 249
>AF134480-1|AAP97257.1| 341|Homo sapiens MO25-like protein protein.
Length = 341
Score = 338 bits (832), Expect = 1e-92
Identities = 165/250 (66%), Positives = 202/250 (80%), Gaps = 4/250 (1%)
Frame = +2
Query: 122 MPL-FGKSQKSPAELVRSLKDAVTALER---GDKKAEKAQEDVSKNLVLIKNMLYGTSDA 289
MP FGKS KSPA++V++LK+++ LE+ DKKAEKA E+VSKNLV +K +LYGT++
Sbjct: 1 MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK 60
Query: 290 EPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEY 469
EPQT+ VAQLAQE+Y IDFEGKKDVAQ+FNN+LRRQIGTR+PTVEY
Sbjct: 61 EPQTEA-VAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEY 119
Query: 470 ICTKPEILFTLMSGYEHQEIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFD 649
ICT+ ILF L+ GYE EIA NCG MLREC R+E LAKI+L+S+ FY+FFRYVE+STFD
Sbjct: 120 ICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFD 179
Query: 650 IASDAFSTFKELLTRHKILCAEFLXANYDKVFSHYQRLLNSENYVTRRQSLKLLGELLLD 829
IASDAF+TFK+LLTRHK+L AEF+ + FS Y++LL+SENYVT+RQSLKLLGELLLD
Sbjct: 180 IASDAFATFKDLLTRHKLLSAEFMVLLSFRFFSEYEKLLHSENYVTKRQSLKLLGELLLD 239
Query: 830 RHNFSIMTRY 859
RHNF+IMT+Y
Sbjct: 240 RHNFTIMTKY 249
>AL138875-4|CAI10893.1| 337|Homo sapiens calcium binding protein
39-like protein.
Length = 337
Score = 329 bits (808), Expect = 9e-90
Identities = 156/249 (62%), Positives = 193/249 (77%)
Frame = +2
Query: 113 LNTMPLFGKSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAE 292
+ MPLF KS K+PAE+V+ LKD + LE+ DKK +KA E+VSK+L +K +L GT++ E
Sbjct: 1 MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKE 60
Query: 293 PQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEYI 472
P T+ VAQLAQE+Y IDFEGKKDV Q+FNN+LRRQIGTRSPTVEYI
Sbjct: 61 PPTEA-VAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYI 119
Query: 473 CTKPEILFTLMSGYEHQEIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFDI 652
P ILF L+ GYE +IA CG MLREC R+E LAKI+L+S+ F +FF+YVE+STFDI
Sbjct: 120 SAHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDI 179
Query: 653 ASDAFSTFKELLTRHKILCAEFLXANYDKVFSHYQRLLNSENYVTRRQSLKLLGELLLDR 832
ASDAF+TFK+LLTRHK+L A+FL NYD +F Y++LL SENYVT+RQSLKLLGEL+LDR
Sbjct: 180 ASDAFATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDR 239
Query: 833 HNFSIMTRY 859
HNF+IMT+Y
Sbjct: 240 HNFAIMTKY 248
>AL136218-3|CAI10816.1| 337|Homo sapiens calcium binding protein
39-like protein.
Length = 337
Score = 329 bits (808), Expect = 9e-90
Identities = 156/249 (62%), Positives = 193/249 (77%)
Frame = +2
Query: 113 LNTMPLFGKSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAE 292
+ MPLF KS K+PAE+V+ LKD + LE+ DKK +KA E+VSK+L +K +L GT++ E
Sbjct: 1 MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKE 60
Query: 293 PQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEYI 472
P T+ VAQLAQE+Y IDFEGKKDV Q+FNN+LRRQIGTRSPTVEYI
Sbjct: 61 PPTEA-VAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYI 119
Query: 473 CTKPEILFTLMSGYEHQEIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFDI 652
P ILF L+ GYE +IA CG MLREC R+E LAKI+L+S+ F +FF+YVE+STFDI
Sbjct: 120 SAHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDI 179
Query: 653 ASDAFSTFKELLTRHKILCAEFLXANYDKVFSHYQRLLNSENYVTRRQSLKLLGELLLDR 832
ASDAF+TFK+LLTRHK+L A+FL NYD +F Y++LL SENYVT+RQSLKLLGEL+LDR
Sbjct: 180 ASDAFATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDR 239
Query: 833 HNFSIMTRY 859
HNF+IMT+Y
Sbjct: 240 HNFAIMTKY 248
>BC010993-1|AAH10993.2| 337|Homo sapiens calcium binding protein
39-like protein.
Length = 337
Score = 326 bits (800), Expect = 8e-89
Identities = 155/249 (62%), Positives = 192/249 (77%)
Frame = +2
Query: 113 LNTMPLFGKSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAE 292
+ MPLF KS K+PAE+V+ LKD + LE+ DKK +KA E+VSK+L +K +L GT++ E
Sbjct: 1 MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKE 60
Query: 293 PQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEYI 472
P T+ VAQLAQE+Y IDFE KKDV Q+FNN+LRRQIGTRSPTVEYI
Sbjct: 61 PPTEA-VAQLAQELYSSGLLVTLIADLQLIDFEEKKDVTQIFNNILRRQIGTRSPTVEYI 119
Query: 473 CTKPEILFTLMSGYEHQEIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFDI 652
P ILF L+ GYE +IA CG MLREC R+E LAKI+L+S+ F +FF+YVE+STFDI
Sbjct: 120 SAHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDI 179
Query: 653 ASDAFSTFKELLTRHKILCAEFLXANYDKVFSHYQRLLNSENYVTRRQSLKLLGELLLDR 832
ASDAF+TFK+LLTRHK+L A+FL NYD +F Y++LL SENYVT+RQSLKLLGEL+LDR
Sbjct: 180 ASDAFATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDR 239
Query: 833 HNFSIMTRY 859
HNF+IMT+Y
Sbjct: 240 HNFAIMTKY 248
>AK022639-1|BAB14147.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ12577 fis, clone NT2RM4001047, highly similar to
MO25 PROTEIN. ).
Length = 289
Score = 274 bits (673), Expect = 2e-73
Identities = 129/201 (64%), Positives = 157/201 (78%)
Frame = +2
Query: 257 IKNMLYGTSDAEPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRR 436
+K +L GT++ EP T+ VAQLAQE+Y IDFEGKKDV Q+FNN+LRR
Sbjct: 1 MKEILCGTNEKEPPTEA-VAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRR 59
Query: 437 QIGTRSPTVEYICTKPEILFTLMSGYEHQEIASNCGTMLRECARYEALAKIMLYSDDFYN 616
QIGTRSPTVEYI P ILF L+ GYE +IA CG MLREC R+E L KI+L+S+ F +
Sbjct: 60 QIGTRSPTVEYISAHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLVKIILFSNQFRD 119
Query: 617 FFRYVEVSTFDIASDAFSTFKELLTRHKILCAEFLXANYDKVFSHYQRLLNSENYVTRRQ 796
FF+YVE+STFDIASDAF+TFK+LLTRHK+L A+FL NYD +F Y++LL SENYVT+RQ
Sbjct: 120 FFKYVELSTFDIASDAFATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQ 179
Query: 797 SLKLLGELLLDRHNFSIMTRY 859
SLKLLGEL+LDRHNF+IMT+Y
Sbjct: 180 SLKLLGELILDRHNFAIMTKY 200
>AL138875-3|CAI10892.1| 280|Homo sapiens calcium binding protein
39-like protein.
Length = 280
Score = 238 bits (583), Expect = 2e-62
Identities = 123/212 (58%), Positives = 150/212 (70%)
Frame = +2
Query: 224 AQEDVSKNLVLIKNMLYGTSDAEPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKD 403
A E+VSK+L +K +L GT++ EP T+ VAQLAQE+Y IDFEGKKD
Sbjct: 1 ASEEVSKSLQAMKEILCGTNEKEPPTEA-VAQLAQELYSSGLLVTLIADLQLIDFEGKKD 59
Query: 404 VAQVFNNVLRRQIGTRSPTVEYICTKPEILFTLMSGYEHQEIASNCGTMLRECARYEALA 583
V Q+FNN+LRRQIGTRSPTVEYI P ILF L+ GYE +IA CG MLREC R+E LA
Sbjct: 60 VTQIFNNILRRQIGTRSPTVEYISAHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLA 119
Query: 584 KIMLYSDDFYNFFRYVEVSTFDIASDAFSTFKELLTRHKILCAEFLXANYDKVFSHYQRL 763
KI+L+S+ F +FF+YVE+STFDIASDAF+TF K+F Y++L
Sbjct: 120 KIILFSNQFRDFFKYVELSTFDIASDAFATF--------------------KIFEDYEKL 159
Query: 764 LNSENYVTRRQSLKLLGELLLDRHNFSIMTRY 859
L SENYVT+RQSLKLLGEL+LDRHNF+IMT+Y
Sbjct: 160 LQSENYVTKRQSLKLLGELILDRHNFAIMTKY 191
>AL136218-1|CAI10814.1| 280|Homo sapiens calcium binding protein
39-like protein.
Length = 280
Score = 238 bits (583), Expect = 2e-62
Identities = 123/212 (58%), Positives = 150/212 (70%)
Frame = +2
Query: 224 AQEDVSKNLVLIKNMLYGTSDAEPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKD 403
A E+VSK+L +K +L GT++ EP T+ VAQLAQE+Y IDFEGKKD
Sbjct: 1 ASEEVSKSLQAMKEILCGTNEKEPPTEA-VAQLAQELYSSGLLVTLIADLQLIDFEGKKD 59
Query: 404 VAQVFNNVLRRQIGTRSPTVEYICTKPEILFTLMSGYEHQEIASNCGTMLRECARYEALA 583
V Q+FNN+LRRQIGTRSPTVEYI P ILF L+ GYE +IA CG MLREC R+E LA
Sbjct: 60 VTQIFNNILRRQIGTRSPTVEYISAHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLA 119
Query: 584 KIMLYSDDFYNFFRYVEVSTFDIASDAFSTFKELLTRHKILCAEFLXANYDKVFSHYQRL 763
KI+L+S+ F +FF+YVE+STFDIASDAF+TF K+F Y++L
Sbjct: 120 KIILFSNQFRDFFKYVELSTFDIASDAFATF--------------------KIFEDYEKL 159
Query: 764 LNSENYVTRRQSLKLLGELLLDRHNFSIMTRY 859
L SENYVT+RQSLKLLGEL+LDRHNF+IMT+Y
Sbjct: 160 LQSENYVTKRQSLKLLGELILDRHNFAIMTKY 191
>AL136218-2|CAI10815.1| 132|Homo sapiens calcium binding protein
39-like protein.
Length = 132
Score = 152 bits (369), Expect = 1e-36
Identities = 75/133 (56%), Positives = 93/133 (69%)
Frame = +2
Query: 113 LNTMPLFGKSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAE 292
+ MPLF KS K+PAE+V+ LKD + LE+ DKK +KA E+VSK+L +K +L GT++ E
Sbjct: 1 MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKE 60
Query: 293 PQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEYI 472
P T+ VAQLAQE+Y IDFEGKKDV Q+FNN+LRRQIGTRSPTVEYI
Sbjct: 61 PPTEA-VAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYI 119
Query: 473 CTKPEILFTLMSG 511
P ILF L+ G
Sbjct: 120 SAHPHILFMLLKG 132
>AC084031-1|AAY14829.1| 38|Homo sapiens unknown protein.
Length = 38
Score = 41.1 bits (92), Expect = 0.005
Identities = 21/38 (55%), Positives = 29/38 (76%), Gaps = 4/38 (10%)
Frame = +2
Query: 122 MPL-FGKSQKSPAELVRSLKDAVTALER---GDKKAEK 223
MP FGKS KSPA++V++LK+++ LE+ DKKAEK
Sbjct: 1 MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEK 38
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,818,127
Number of Sequences: 237096
Number of extensions: 2074087
Number of successful extensions: 4333
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4319
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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