Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_F03
(651 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 25 0.41
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 25 0.41
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 25 0.41
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 22 5.0
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 21 6.7
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 21 6.7
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 21 6.7
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 21 8.8
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 21 8.8
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 8.8
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 21 8.8
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 21 8.8
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 21 8.8
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 25.4 bits (53), Expect = 0.41
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -3
Query: 340 YCLICAIVLCSCCRLGSLNL 281
YCL V C C SLN+
Sbjct: 291 YCLFLLFVFCDCSHQASLNI 310
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 25.4 bits (53), Expect = 0.41
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -3
Query: 340 YCLICAIVLCSCCRLGSLNL 281
YCL V C C SLN+
Sbjct: 291 YCLFLLFVFCDCSHQASLNI 310
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 25.4 bits (53), Expect = 0.41
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -3
Query: 340 YCLICAIVLCSCCRLGSLNL 281
YCL V C C SLN+
Sbjct: 291 YCLFLLFVFCDCSHQASLNI 310
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 149 RCAVSLRPTLRFRHAH 196
RC SLRP L ++ H
Sbjct: 281 RCIFSLRPGLTHKYTH 296
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 421 KYKIGEESHSPQYHGVAEISETEAMKRKKHEQTEK 525
KY+ E + +AE E E +KR K EK
Sbjct: 46 KYQKAVEKLLTEQKELAEKEEAETLKRYKLNDLEK 80
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 421 KYKIGEESHSPQYHGVAEISETEAMKRKKHEQTEK 525
KY+ E + +AE E E +KR K EK
Sbjct: 206 KYQKAVEKLLTEQKELAEKEEAETLKRYKLNDLEK 240
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 421 KYKIGEESHSPQYHGVAEISETEAMKRKKHEQTEK 525
KY+ E + +AE E E +KR K EK
Sbjct: 206 KYQKAVEKLLTEQKELAEKEEAETLKRYKLNDLEK 240
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 21.0 bits (42), Expect = 8.8
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 57 RKTIKE*VTEIKEIN 101
+KTIKE TE +E+N
Sbjct: 266 KKTIKEKYTEDEELN 280
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 583 NFKKEINDDEETPSITINI 639
N KKE DEE P+ + +
Sbjct: 79 NVKKEDESDEEKPTTSFKL 97
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = -3
Query: 358 LYSGTLYCLICAIVLCSCCRLGSLNLILS 272
L + +YC + VLC G+ +++++
Sbjct: 409 LVTALVYCSLAIFVLCELLIEGTTSILIN 437
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 21.0 bits (42), Expect = 8.8
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 397 FRLMKKYLKYKIGEESHSPQYHGVAEISE 483
F ++ YL +GE S + + EISE
Sbjct: 183 FTILNNYLTIVLGETWTSLSVYHLVEISE 211
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 21.0 bits (42), Expect = 8.8
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 337 CLICAIVLCSC 305
CL+ I+LC C
Sbjct: 266 CLLSLIILCDC 276
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 21.0 bits (42), Expect = 8.8
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 397 FRLMKKYLKYKIGEESHSPQYHGVAEISE 483
F ++ YL +GE S + + EISE
Sbjct: 179 FTILNNYLTIVLGETWTSLSVYHLVEISE 207
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,251
Number of Sequences: 336
Number of extensions: 2737
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -