Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_F02
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    28   0.093
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    28   0.093
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    25   0.66 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.2  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    24   1.2  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   6.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   6.1  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   8.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.1  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 27.9 bits (59), Expect = 0.093
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +2

Query: 65  IIYGCVFYLKIQLVIKFTNVVLIYLTKLIIMQQFTLLFV---VHLTALFASTA 214
           +I+GC+F LK+  V K    V +    L +   +  L+V   +HL+ L    A
Sbjct: 104 VIFGCIFALKVIEVFKNIEEVDVAFRSLAVWVPYKHLYVNILIHLSGLVTIVA 156


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 27.9 bits (59), Expect = 0.093
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +2

Query: 65  IIYGCVFYLKIQLVIKFTNVVLIYLTKLIIMQQFTLLFV---VHLTALFASTA 214
           +I+GC+F LK+  V K    V +    L +   +  L+V   +HL+ L    A
Sbjct: 104 VIFGCIFALKVIEVFKNIEEVDVAFRSLAVWVPYKHLYVNILIHLSGLVTIVA 156


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 287 DKIFHHCNLKSVLVSCSKNHHNLY 216
           +KI H  NL   LV  +K+H++LY
Sbjct: 228 NKIKHLVNLHKNLVKVAKDHNSLY 251


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 296 FLYDKIFHHCNLKSVLVSCSKNHHNLYR 213
           F  +K  + C  KS+L S  K+H N+YR
Sbjct: 259 FQCNKCDYTCVNKSMLNSHMKSHSNVYR 286


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 296 FLYDKIFHHCNLKSVLVSCSKNHHNLYR 213
           F  +K  + C  KS+L S  K+H N+YR
Sbjct: 17  FQCNKCDYTCVNKSMLNSHMKSHSNVYR 44


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 114 NLITSWIFK*KTHP 73
           N++ +W+F+  THP
Sbjct: 191 NILRAWLFQHLTHP 204


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 114 NLITSWIFK*KTHP 73
           N++ +W+F+  THP
Sbjct: 347 NILRAWLFQHLTHP 360


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 188 LTALFASTAGIDYDGFLNMKLEHSLNCND 274
           L A+F S A I+Y      KL  +L CN+
Sbjct: 156 LLAVFMSLALIEYILMQTNKLVLALECNN 184


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 188 LTALFASTAGIDYDGFLNMKLEHSLNCND 274
           L A+F S A I+Y      KL  +L CN+
Sbjct: 156 LLAVFMSLALIEYILMQTNKLVLALECNN 184


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 188 LTALFASTAGIDYDGFLNMKLEHSLNCND 274
           L A+F S A I+Y      KL  +L CN+
Sbjct: 156 LLAVFMSLALIEYILMQTNKLVLALECNN 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,417
Number of Sequences: 336
Number of extensions: 2824
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)