Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_F02
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   4.5  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   7.8  

>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 269 CNLKSVLVSCSKNHHNLY 216
           CNLK + + CS  H  LY
Sbjct: 204 CNLKVMTICCSIGHCTLY 221



 Score = 23.8 bits (49), Expect = 5.9
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 518 WILPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFY 625
           WI P  ++ A  ++  NST+P++   +   L  KFY
Sbjct: 143 WIAPIPSICAHYYRSTNSTEPVRFVQH---LEVKFY 175


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 657 ILHHIYKKWNVTERHVKRE 713
           +LHH+   +NV ER V  E
Sbjct: 10  LLHHLLDNYNVLERPVVNE 28


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,889
Number of Sequences: 2352
Number of extensions: 11254
Number of successful extensions: 48
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)