Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_F01
         (660 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    48   1e-07
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           46   3e-07
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    30   0.017
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    28   0.069
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    27   0.12 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    25   0.85 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         24   1.1  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    24   1.1  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    24   1.1  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   2.6  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   3.4  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   4.5  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   7.9  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 47.6 bits (108), Expect = 1e-07
 Identities = 22/52 (42%), Positives = 34/52 (65%)
 Frame = +2

Query: 17  FPNALKLDAAGLMWILVDKLPRFLYKPLDPNEVNYSIYSISAKDAIAGTACE 172
           FP  +K++  GL WI+ D++P FL   L+  +V + I ++  +DAIAGT CE
Sbjct: 364 FPADVKINR-GLXWIISDRMPVFLLXTLNYTDVXFRILTMPVRDAIAGTICE 414


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 46.0 bits (104), Expect = 3e-07
 Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
 Frame = +2

Query: 17  FPNALKLDAA--GLMWILVDKLPRFLYKPLDPNEVNYSIYSISAKDAIAGTACE 172
           FPN +K+D      +W+L +KL  +LY  +D +++NY I+  + K+A+  T C+
Sbjct: 483 FPNDIKVDHEYDQNVWVLSNKLAMYLYGSIDSSKINYRIFKANVKEAVKDTXCD 536


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 30.3 bits (65), Expect = 0.017
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +2

Query: 2   PKLXAFPNALKLDAAGL----MWILVDKLPRFLYKPLDPNEVNYSIYSISAKDAIAGTAC 169
           P+   FP+ +K+ ++      +WI      +++   L+ NE N+ I +    + + GT C
Sbjct: 353 PETLQFPSGMKIISSKKDRQELWIFTISFQKYMSGTLNSNETNFRIQAGLVDELVRGTKC 412

Query: 170 E 172
           +
Sbjct: 413 D 413


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 28.3 bits (60), Expect = 0.069
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +2

Query: 53  MWILVDKLPRFLYKPLDPNEVNYSIYSISAKDAIAGTAC 169
           M  L  KL +F+    + NEVN+ I   +  D I  T C
Sbjct: 545 MMALSMKLQKFINNDYNFNEVNFRILGANVNDLIMNTRC 583


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 53  MWILVDKLPRFLYKPLDPNEVNYSIYSISAKDAIAGTACE 172
           +WI+ +K  +     L+ NEVN+ I +      I  T CE
Sbjct: 373 IWIVSNKYQKIANGDLNFNEVNFRILNAPVNQLIRYTRCE 412


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 320 VNSLMSSYRINKTSNGSLEQFSNKNETHL 406
           VN+L+ + R  K++N +  Q   KN+ HL
Sbjct: 408 VNNLIKNTRCAKSNNQNNNQNKYKNQAHL 436


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = +2

Query: 59  ILVDKLPRFLYKPLDPNEVNYSIYSISAKDAIAGTACE 172
           +L +K+ + +    + ++VN+ I + +  + I  T CE
Sbjct: 380 VLSNKMQKMVNNDFNFDDVNFRIMNANVNELILNTRCE 417


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = +2

Query: 59  ILVDKLPRFLYKPLDPNEVNYSIYSISAKDAIAGTACE 172
           +L +K+ + +    + ++VN+ I + +  + I  T CE
Sbjct: 380 VLSNKMQKMVNNDFNFDDVNFRIMNANVNELILNTRCE 417


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = +2

Query: 59  ILVDKLPRFLYKPLDPNEVNYSIYSISAKDAIAGTACE 172
           +L +K+ + +    + ++VN+ I + +  + I  T CE
Sbjct: 380 VLSNKMQKMVNNDFNFDDVNFRIMNANVNELILNTRCE 417


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/39 (23%), Positives = 21/39 (53%)
 Frame = +2

Query: 53  MWILVDKLPRFLYKPLDPNEVNYSIYSISAKDAIAGTAC 169
           M +L +++ + +    + ++VN+ I   + K+ I  T C
Sbjct: 376 MLVLSNRMQKIVNDDFNFDDVNFRILGANVKELIRNTHC 414


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/39 (23%), Positives = 19/39 (48%)
 Frame = +2

Query: 53  MWILVDKLPRFLYKPLDPNEVNYSIYSISAKDAIAGTAC 169
           M  L +++ + +    + N+VN+ I   +  D +  T C
Sbjct: 381 MLALSNRMQKIINNDFNFNDVNFRILGANVDDLMRNTRC 419


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 68  DKLPRFLYKPLDPNEVNYSIYSISAKDAIAGTAC 169
           +++ + +Y   D N+VN+ I   +  D I  T C
Sbjct: 381 NRIQKVIYG-FDFNDVNFRILIANVNDLIKNTRC 413


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 509 YFCHKKSITHNNLLLLSKNTIK 444
           Y  + K+I  NN+ +  +NT K
Sbjct: 46  YLTYAKNILPNNISIAGQNTYK 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,588
Number of Sequences: 438
Number of extensions: 3639
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)