Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_E22
(732 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019272-1|AAH19272.1| 142|Homo sapiens thioredoxin-like 4A pro... 254 3e-67
BC001046-1|AAH01046.1| 142|Homo sapiens thioredoxin-like 4A pro... 254 3e-67
AF146373-1|AAF17332.1| 142|Homo sapiens thioredoxin-like U5 snR... 254 3e-67
AF023611-1|AAB81950.1| 142|Homo sapiens Dim1p homolog protein. 254 3e-67
AF023612-1|AAB81951.1| 91|Homo sapiens Dim1p homolog protein. 135 1e-31
CR457240-1|CAG33521.1| 149|Homo sapiens FLJ20511 protein. 96 1e-19
BC009646-1|AAH09646.1| 149|Homo sapiens thioredoxin-like 4B pro... 96 1e-19
AY566808-1|AAS68520.1| 149|Homo sapiens Dim1-like protein protein. 96 1e-19
AK000518-1|BAA91224.1| 149|Homo sapiens protein ( Homo sapiens ... 96 1e-19
AK222889-1|BAD96609.1| 149|Homo sapiens thioredoxin-like 4B var... 94 4e-19
AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy c... 31 4.3
>BC019272-1|AAH19272.1| 142|Homo sapiens thioredoxin-like 4A
protein.
Length = 142
Score = 254 bits (621), Expect = 3e-67
Identities = 113/124 (91%), Positives = 120/124 (96%)
Frame = +3
Query: 216 VNSDEKQNVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP 395
++ +++ VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP
Sbjct: 19 LSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP 78
Query: 396 CTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETVYRGARKGRGLVVSPKDYST 575
CTVMFFFRNKHIMIDLGTGNNNKINW +EDKQEM+DIIETVYRGARKGRGLVVSPKDYST
Sbjct: 79 CTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGARKGRGLVVSPKDYST 138
Query: 576 KYRY 587
KYRY
Sbjct: 139 KYRY 142
>BC001046-1|AAH01046.1| 142|Homo sapiens thioredoxin-like 4A
protein.
Length = 142
Score = 254 bits (621), Expect = 3e-67
Identities = 113/124 (91%), Positives = 120/124 (96%)
Frame = +3
Query: 216 VNSDEKQNVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP 395
++ +++ VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP
Sbjct: 19 LSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP 78
Query: 396 CTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETVYRGARKGRGLVVSPKDYST 575
CTVMFFFRNKHIMIDLGTGNNNKINW +EDKQEM+DIIETVYRGARKGRGLVVSPKDYST
Sbjct: 79 CTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGARKGRGLVVSPKDYST 138
Query: 576 KYRY 587
KYRY
Sbjct: 139 KYRY 142
>AF146373-1|AAF17332.1| 142|Homo sapiens thioredoxin-like U5 snRNP
protein U5-15kD protein.
Length = 142
Score = 254 bits (621), Expect = 3e-67
Identities = 113/124 (91%), Positives = 120/124 (96%)
Frame = +3
Query: 216 VNSDEKQNVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP 395
++ +++ VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP
Sbjct: 19 LSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP 78
Query: 396 CTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETVYRGARKGRGLVVSPKDYST 575
CTVMFFFRNKHIMIDLGTGNNNKINW +EDKQEM+DIIETVYRGARKGRGLVVSPKDYST
Sbjct: 79 CTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGARKGRGLVVSPKDYST 138
Query: 576 KYRY 587
KYRY
Sbjct: 139 KYRY 142
>AF023611-1|AAB81950.1| 142|Homo sapiens Dim1p homolog protein.
Length = 142
Score = 254 bits (621), Expect = 3e-67
Identities = 113/124 (91%), Positives = 120/124 (96%)
Frame = +3
Query: 216 VNSDEKQNVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP 395
++ +++ VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP
Sbjct: 19 LSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP 78
Query: 396 CTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETVYRGARKGRGLVVSPKDYST 575
CTVMFFFRNKHIMIDLGTGNNNKINW +EDKQEM+DIIETVYRGARKGRGLVVSPKDYST
Sbjct: 79 CTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGARKGRGLVVSPKDYST 138
Query: 576 KYRY 587
KYRY
Sbjct: 139 KYRY 142
>AF023612-1|AAB81951.1| 91|Homo sapiens Dim1p homolog protein.
Length = 91
Score = 135 bits (327), Expect = 1e-31
Identities = 59/67 (88%), Positives = 64/67 (95%)
Frame = +3
Query: 216 VNSDEKQNVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP 395
++ +++ VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP
Sbjct: 19 LSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDP 78
Query: 396 CTVMFFF 416
CTVMFFF
Sbjct: 79 CTVMFFF 85
>CR457240-1|CAG33521.1| 149|Homo sapiens FLJ20511 protein.
Length = 149
Score = 96.3 bits (229), Expect = 1e-19
Identities = 44/114 (38%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Frame = +3
Query: 228 EKQNVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYEL-YDPCTV 404
EK V+RFG D DP C+++D++L + + A IYLVD+ + + + +++ Y P TV
Sbjct: 23 EKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTV 82
Query: 405 MFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETVYRGARKGRGLVVSPKD 566
FFF +H+ +D G+ ++ K + KQ+ ID+IE +YRGA +G+ +V SP D
Sbjct: 83 -FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGAMRGKLIVQSPID 135
>BC009646-1|AAH09646.1| 149|Homo sapiens thioredoxin-like 4B
protein.
Length = 149
Score = 96.3 bits (229), Expect = 1e-19
Identities = 44/114 (38%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Frame = +3
Query: 228 EKQNVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYEL-YDPCTV 404
EK V+RFG D DP C+++D++L + + A IYLVD+ + + + +++ Y P TV
Sbjct: 23 EKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTV 82
Query: 405 MFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETVYRGARKGRGLVVSPKD 566
FFF +H+ +D G+ ++ K + KQ+ ID+IE +YRGA +G+ +V SP D
Sbjct: 83 -FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGAMRGKLIVQSPID 135
>AY566808-1|AAS68520.1| 149|Homo sapiens Dim1-like protein protein.
Length = 149
Score = 96.3 bits (229), Expect = 1e-19
Identities = 44/114 (38%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Frame = +3
Query: 228 EKQNVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYEL-YDPCTV 404
EK V+RFG D DP C+++D++L + + A IYLVD+ + + + +++ Y P TV
Sbjct: 23 EKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTV 82
Query: 405 MFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETVYRGARKGRGLVVSPKD 566
FFF +H+ +D G+ ++ K + KQ+ ID+IE +YRGA +G+ +V SP D
Sbjct: 83 -FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGAMRGKLIVQSPID 135
>AK000518-1|BAA91224.1| 149|Homo sapiens protein ( Homo sapiens
cDNA FLJ20511 fis, clone KAT09708. ).
Length = 149
Score = 96.3 bits (229), Expect = 1e-19
Identities = 44/114 (38%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Frame = +3
Query: 228 EKQNVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYEL-YDPCTV 404
EK V+RFG D DP C+++D++L + + A IYLVD+ + + + +++ Y P TV
Sbjct: 23 EKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTV 82
Query: 405 MFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETVYRGARKGRGLVVSPKD 566
FFF +H+ +D G+ ++ K + KQ+ ID+IE +YRGA +G+ +V SP D
Sbjct: 83 -FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGAMRGKLIVQSPID 135
>AK222889-1|BAD96609.1| 149|Homo sapiens thioredoxin-like 4B
variant protein.
Length = 149
Score = 94.3 bits (224), Expect = 4e-19
Identities = 43/114 (37%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Frame = +3
Query: 228 EKQNVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYEL-YDPCTV 404
EK V+RFG D DP C+++D++L + + A I+LVD+ + + + +++ Y P TV
Sbjct: 23 EKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIHLVDVDQTAVYTQYFDISYIPSTV 82
Query: 405 MFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETVYRGARKGRGLVVSPKD 566
FFF +H+ +D G+ ++ K + KQ+ ID+IE +YRGA +G+ +V SP D
Sbjct: 83 -FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGAMRGKLIVQSPID 135
>AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy chain
DNAH5 protein.
Length = 4624
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -2
Query: 230 LVTVHVFYRSVFKKLCLLRLTSDFRVV*SRRCLFCYF--ITKRMFCEIENFKFXXXX*YV 57
L+T+HV R +F LC + + S ++C F YF + +M I + F ++
Sbjct: 1889 LITIHVHQRDIFDDLCHMHIKSPMDFEWLKQCRF-YFNEDSDKMMIHITDVAFIYQNEFL 1947
Query: 56 GIT 48
G T
Sbjct: 1948 GCT 1950
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,793,179
Number of Sequences: 237096
Number of extensions: 1883510
Number of successful extensions: 3188
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3169
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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