Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_E19
(854 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1252 - 35748000-35748173,35748243-35748375,35749771-357498... 161 5e-40
05_05_0135 - 22626163-22626198,22626391-22626441,22626516-226266... 156 2e-38
07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343 154 7e-38
05_07_0196 + 28352320-28352522,28352679-28352808,28353774-283538... 151 5e-37
03_04_0055 + 16891212-16891848,16893166-16893206 149 3e-36
08_01_0498 - 4327502-4328395 146 2e-35
01_07_0092 - 41021743-41022276 138 5e-33
02_05_0591 - 30183105-30183869 131 8e-31
06_01_1181 + 10148653-10149405 124 7e-29
01_07_0091 - 41013837-41014271 113 1e-25
02_05_0592 - 30210219-30210757,30210898-30210919 81 1e-15
08_02_0516 + 18080706-18080760,18081796-18081885,18082479-180825... 67 1e-11
09_06_0334 - 22389087-22389223,22389578-22389696,22390192-22390439 56 5e-08
01_05_0681 - 24242485-24242560,24242721-24242785,24242874-242430... 30 2.7
04_03_0923 + 20843477-20845044,20846081-20846996 29 3.6
09_06_0108 - 20912236-20912364,20912470-20912601,20912718-209130... 29 4.7
03_06_0145 - 31973924-31975837 29 6.2
02_05_1152 + 34494423-34494586,34494725-34494781,34494851-344949... 29 6.2
>01_06_1252 -
35748000-35748173,35748243-35748375,35749771-35749847,
35750465-35750509,35750584-35750679,35751125-35751130,
35751259-35751388,35751510-35751706
Length = 285
Score = 161 bits (392), Expect = 5e-40
Identities = 74/110 (67%), Positives = 94/110 (85%), Gaps = 1/110 (0%)
Frame = +3
Query: 348 LEDENNSDSGSKSNAP-LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFI 524
+ D + +SGS + +REQDRFLPIANI++IMK+A+P NGKIAKDA+E +QEC+SEFI
Sbjct: 1 MADAGHDESGSPPRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFI 60
Query: 525 SFVTSEASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRLYLTKYREI 674
SFVTSEASD+C+ EKRKTINGED+LFA+ TLGF+ YV PL++YL KYRE+
Sbjct: 61 SFVTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYREM 110
>05_05_0135 -
22626163-22626198,22626391-22626441,22626516-22626608,
22627249-22627254,22628051-22628180,22628333-22628583
Length = 188
Score = 156 bits (379), Expect = 2e-38
Identities = 69/100 (69%), Positives = 89/100 (89%)
Frame = +3
Query: 375 GSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDR 554
G +REQDRFLPIANI++IMK+AIP NGKIAKDA+E VQEC+SEFISF+TSEASD+
Sbjct: 29 GGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDK 88
Query: 555 CKVEKRKTINGEDVLFALNTLGFDNYVKPLRLYLTKYREI 674
C+ EKRKTING+D+L+A+ TLGF++Y++PL++YL KYRE+
Sbjct: 89 CQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREM 128
>07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343
Length = 229
Score = 154 bits (374), Expect = 7e-38
Identities = 71/118 (60%), Positives = 97/118 (82%), Gaps = 4/118 (3%)
Frame = +3
Query: 357 ENNSDSGSKSNA----PLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFI 524
+++++SG SNA REQDRFLPIAN+++IMKRA+P N KI+KDA+E VQEC+SEFI
Sbjct: 3 DSDNESGGPSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFI 62
Query: 525 SFVTSEASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRLYLTKYREIVMSPALFA 698
SF+T EASD+C+ EKRKTING+D+L+A+ TLGF++Y+ PL+LYL K+RE+ A+ A
Sbjct: 63 SFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEKAIGA 120
>05_07_0196 +
28352320-28352522,28352679-28352808,28353774-28353851,
28355562-28355664,28356109-28356302,28356501-28356518
Length = 241
Score = 151 bits (367), Expect = 5e-37
Identities = 67/106 (63%), Positives = 87/106 (82%)
Frame = +3
Query: 354 DENNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFV 533
D + G +EQDRFLPIANI +IM+RA+PENGKIAKD++E VQEC+SEFISF+
Sbjct: 6 DGTENGGGGGGGGVGKEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFI 65
Query: 534 TSEASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRLYLTKYRE 671
TSEASD+C EKRKTING+D+++++ TLGF++YV+PL+LYL YRE
Sbjct: 66 TSEASDKCLKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLRLYRE 111
>03_04_0055 + 16891212-16891848,16893166-16893206
Length = 225
Score = 149 bits (361), Expect = 3e-36
Identities = 69/112 (61%), Positives = 93/112 (83%), Gaps = 6/112 (5%)
Frame = +3
Query: 357 ENNSDSGSKSN------APLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISE 518
++++DSG SN + REQDRFLPIAN+++IMK+A+P N KI+KDA+E VQEC+SE
Sbjct: 3 DSDNDSGGPSNYAGGELSSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSE 62
Query: 519 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRLYLTKYREI 674
FISF+T EASD+C+ EKRKTING+D+L+A+ TLGF++YV PL+ YL K+REI
Sbjct: 63 FISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDPLKHYLHKFREI 114
>08_01_0498 - 4327502-4328395
Length = 297
Score = 146 bits (354), Expect = 2e-35
Identities = 63/99 (63%), Positives = 85/99 (85%)
Frame = +3
Query: 375 GSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDR 554
G ++P +EQDRFLPIAN+++IMKR++P N KI+K+++E VQEC+SEFISFVT EASD+
Sbjct: 49 GGGGDSPAKEQDRFLPIANVSRIMKRSLPANAKISKESKETVQECVSEFISFVTGEASDK 108
Query: 555 CKVEKRKTINGEDVLFALNTLGFDNYVKPLRLYLTKYRE 671
C+ EKRKTING+D+L+A+ TLGF+ YV PL+ YL +YRE
Sbjct: 109 CQREKRKTINGDDLLWAMTTLGFEAYVGPLKSYLNRYRE 147
>01_07_0092 - 41021743-41022276
Length = 177
Score = 138 bits (334), Expect = 5e-33
Identities = 59/93 (63%), Positives = 77/93 (82%)
Frame = +3
Query: 396 LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRK 575
++EQDR LPIAN+ +IMK+ +P N KI+K+A+E +QEC+SEFISFVT EASD+C EKRK
Sbjct: 32 IKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRK 91
Query: 576 TINGEDVLFALNTLGFDNYVKPLRLYLTKYREI 674
T+NG+DV +A LGFD+YV P+R YL KYRE+
Sbjct: 92 TVNGDDVCWAFGALGFDDYVDPMRRYLNKYREL 124
>02_05_0591 - 30183105-30183869
Length = 254
Score = 131 bits (316), Expect = 8e-31
Identities = 57/106 (53%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +3
Query: 357 ENNSDSGSKSNAP-LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFV 533
+ N + + AP +REQDR +PIAN+ +IM+R +P + KI+ DA+E +QEC+SE+ISF+
Sbjct: 16 DGNGGAQQAAAAPAIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFI 75
Query: 534 TSEASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRLYLTKYRE 671
T EA++RC+ E+RKTI EDVL+A++ LGFD+YV+PL +YL +YRE
Sbjct: 76 TGEANERCQREQRKTITAEDVLWAMSRLGFDDYVEPLGVYLHRYRE 121
>06_01_1181 + 10148653-10149405
Length = 250
Score = 124 bits (300), Expect = 7e-29
Identities = 54/94 (57%), Positives = 74/94 (78%)
Frame = +3
Query: 390 APLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEK 569
A +REQDR +PIAN+ +IM+R +P + KI+ DA+E +QEC+SEFISFVT EA+DRC E
Sbjct: 27 AVVREQDRLMPIANVIRIMRRVLPPHAKISDDAKEVIQECVSEFISFVTGEANDRCHREH 86
Query: 570 RKTINGEDVLFALNTLGFDNYVKPLRLYLTKYRE 671
RKT+ ED+++A++ LGFD+YV PL YL + RE
Sbjct: 87 RKTVTAEDLVWAMDRLGFDDYVPPLTAYLRRMRE 120
>01_07_0091 - 41013837-41014271
Length = 144
Score = 113 bits (273), Expect = 1e-25
Identities = 49/89 (55%), Positives = 66/89 (74%)
Frame = +3
Query: 405 QDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTIN 584
QD LPIAN+ +IMK +P KI+K A+E +QEC +EFISFVT EAS+RC+ E+RKT+N
Sbjct: 5 QDNLLPIANVGRIMKDGLPPQAKISKRAKETIQECATEFISFVTGEASERCRRERRKTVN 64
Query: 585 GEDVLFALNTLGFDNYVKPLRLYLTKYRE 671
G+DV A+ +LG D+Y + YL +YRE
Sbjct: 65 GDDVCHAMRSLGLDHYADAMHRYLQRYRE 93
>02_05_0592 - 30210219-30210757,30210898-30210919
Length = 186
Score = 80.6 bits (190), Expect = 1e-15
Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Frame = +3
Query: 333 NSDDVLEDENNSDS--GSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQE 506
N D V + SD GS +NA L P+AN+ +++K+ +P KI A+ +
Sbjct: 11 NMDQVKKAAVRSDGVGGSATNAEL-------PMANLVRLIKKVLPGKAKIGGAAKGLTHD 63
Query: 507 CISEFISFVTSEASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRLYLTKYRE 671
C EF+ FV EAS++ K E R+T+ ED L + LGFD YV P+ Y+ YRE
Sbjct: 64 CAVEFVGFVGDEASEKAKAEHRRTVAPEDYLGSFGDLGFDRYVDPMDAYIHGYRE 118
>08_02_0516 +
18080706-18080760,18081796-18081885,18082479-18082573,
18083658-18083726,18083812-18084393
Length = 296
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/82 (37%), Positives = 55/82 (67%)
Frame = +3
Query: 402 EQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTI 581
++D LP + + KI+K +P + ++A+DA++ + EC EFI+ ++SE+++ C E +KTI
Sbjct: 11 KEDVSLPKSTMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLLSSESNEVCSREDKKTI 70
Query: 582 NGEDVLFALNTLGFDNYVKPLR 647
E VL AL LGF Y++ ++
Sbjct: 71 APEHVLRALQDLGFREYIEEVQ 92
>09_06_0334 - 22389087-22389223,22389578-22389696,22390192-22390439
Length = 167
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/65 (40%), Positives = 40/65 (61%)
Frame = +3
Query: 474 IAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRLY 653
+ KDA E FI ++++ A+D CK KR+TIN +DVL AL+ + F +V+PL
Sbjct: 61 VNKDAMSAFAESARIFIHYLSATANDMCKESKRQTINADDVLKALDEMEFPEFVEPLNTS 120
Query: 654 LTKYR 668
L ++R
Sbjct: 121 LQEFR 125
>01_05_0681 -
24242485-24242560,24242721-24242785,24242874-24243029,
24243073-24243121,24243291-24243366,24243456-24243666,
24244038-24244160,24244245-24244363,24244439-24244532,
24245123-24245233,24245336-24245392
Length = 378
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +3
Query: 480 KDARECVQECISEFISFVTSEASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRLYLT 659
+D E V + IS+F+ ++ +D+ ING D + D YV PL L
Sbjct: 206 EDELELVCKPISDFLETISLNVADQDSSGTISDINGSDGCTPSGIISQD-YVVPLNLIER 264
Query: 660 KYREIVMSPALFAGHNQQI 716
YR + + +L A N +
Sbjct: 265 YYRYVKGTGSLLATSNASL 283
>04_03_0923 + 20843477-20845044,20846081-20846996
Length = 827
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +3
Query: 408 DRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKV 563
D+F P+ +I ++ A EN K+A A EC Q C+S S C V
Sbjct: 356 DKFYPVQSI-RLPHSA--ENVKVATSADECSQACLSNCSCTAYSYGKSGCSV 404
>09_06_0108 -
20912236-20912364,20912470-20912601,20912718-20913071,
20913161-20913407,20913489-20913565,20913971-20914045,
20914118-20914219,20914329-20914447,20914861-20914984,
20915081-20915131,20915247-20915345,20915839-20915949
Length = 539
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 564 EKRKTINGEDVLFALNTLG-FDNYVKPLRLYLTKYREIVMSPAL 692
E RKT E + F TLG + +++Y+T+ +E++M P+L
Sbjct: 103 ENRKTYKLESIEFESLTLGSLPPTFQGMKVYVTEEQELIMEPSL 146
>03_06_0145 - 31973924-31975837
Length = 637
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 279 DLVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSKS 386
D+ +D+G DD VV DV E + D GS S
Sbjct: 262 DMAHVDDGGAATDDNSVVEVTDVAEHTADVDDGSAS 297
>02_05_1152 +
34494423-34494586,34494725-34494781,34494851-34494908,
34494989-34495088,34495270-34495383,34495588-34495810,
34496112-34496246,34496575-34496679,34496906-34497001,
34497387-34497516,34497933-34497983,34498538-34498648,
34499267-34499376,34499490-34499655,34499740-34499820,
34499907-34499975,34500099-34500212,34500699-34500760,
34500894-34500990,34501152-34501271
Length = 720
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 413 IFTNREYS*NNETGNTREWKDSKRCKGMCSGMYIRIHIVCN 535
I+ + YS N+ G + K KRC G+ SG + + +CN
Sbjct: 506 IYLPQRYSPNDIEGKSFCRKTLKRCVGLHSGSSVVVGCICN 546
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,851,110
Number of Sequences: 37544
Number of extensions: 389992
Number of successful extensions: 849
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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