Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_E08
         (824 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    36   0.002
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    27   0.70 
CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase ...    26   1.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   2.1  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   2.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   3.7  
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    24   6.5  
AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding pr...    24   6.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   8.6  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   8.6  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   8.6  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 35.5 bits (78), Expect = 0.002
 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +2

Query: 293 PLPGMQHGFQPGFQPGYQPGFAPGYPQPSGYP-VPVMQQPGPQAPGGWMNMPQ 448
           P+P M+    PG  PG QPG  P  P   G    P+M QP P  P   M  P+
Sbjct: 225 PMP-MRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPR 276



 Score = 29.1 bits (62), Expect = 0.17
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = +2

Query: 323 PGFQPGYQPGFAPGYPQPSGYPVPVMQQPGPQAPGGWMNMPQGL 454
           PG  PG Q    PG   P     P   QP P  PGG    P G+
Sbjct: 183 PGMPPGPQMMRPPGNVGPPRTGTPT--QPQPPRPGGMYPQPPGV 224



 Score = 27.9 bits (59), Expect = 0.40
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 365 YPQPSGYPVPVMQQPGPQAPGGWMNMPQGLSNCPRGLEYLSMIDQ 499
           YPQP G P+P+  Q  P A  G     Q      +G++   M+ Q
Sbjct: 218 YPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQ 262


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 27.1 bits (57), Expect = 0.70
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = +2

Query: 434 MNMPQGLSN-CPRGLEYLSMIDQ--LIMHQKVELLEAFVG 544
           M++  G S  CP+GLE L + D   L++  K + L  F G
Sbjct: 126 MHLDWGSSRTCPKGLELLQLADNLGLVLLNKADCLPTFKG 165


>CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase
           protein.
          Length = 573

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 389 VPVMQQPGPQAPGGWMNMPQGLSNCP 466
           +PV Q P P     W N+ Q  +N P
Sbjct: 545 LPVQQTPNPTRMNLWYNLQQTYANAP 570


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
 Frame = +2

Query: 296 LPGMQHGFQPGFQPGY-QPGFAPG---YPQPS-GYPVPVMQQP 409
           LP  QH   P   P    P +  G   Y QPS  +P P++ QP
Sbjct: 172 LPYPQHVLHPAHHPALLHPAYHTGLHHYYQPSPSHPQPIVPQP 214


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
 Frame = +2

Query: 296 LPGMQHGFQPGFQPGY-QPGFAPG---YPQPS-GYPVPVMQQP 409
           LP  QH   P   P    P +  G   Y QPS  +P P++ QP
Sbjct: 172 LPYPQHVLHPAHHPALLHPAYHTGLHHYYQPSPSHPQPIVPQP 214


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -3

Query: 663 ISKGRKGPQQFLVQQSLSSI 604
           ISKGRK P +  V+++L+++
Sbjct: 918 ISKGRKTPNELTVRRNLATV 937


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +2

Query: 629 RNCCGPLRPFDMKIMDNFNNEVIHLNRPLACDSCC 733
           R+ C P      +++DN    +   +R L C + C
Sbjct: 48  RSACAPKFKVSTEMLDNLRGGIFAEDRELKCYTMC 82


>AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding
           protein protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +2

Query: 629 RNCCGPLRPFDMKIMDNFNNEVIHLNRPLACDSCC 733
           R+ C P      +++DN    +   +R L C + C
Sbjct: 46  RSACAPKFKVSTEMLDNLRGGIFAEDRELKCYTMC 80


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 347 PGFAPGYPQPSGYP 388
           P +A  YP P+GYP
Sbjct: 8   PLYASRYPTPNGYP 21


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 347 PGFAPGYPQPSGYP 388
           P +A  YP P+GYP
Sbjct: 8   PLYASRYPTPNGYP 21


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 347 PGFAPGYPQPSGYP 388
           P +A  YP P+GYP
Sbjct: 8   PLYASRYPTPNGYP 21


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,212
Number of Sequences: 2352
Number of extensions: 18895
Number of successful extensions: 46
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)