Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_E08
         (824 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.5  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    23   2.6  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   4.5  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    22   6.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 293  PLPGMQHGFQPGFQPGYQ 346
            PLP ++HG   GF  GY+
Sbjct: 1030 PLPELRHGDIQGFNVGYR 1047



 Score = 23.8 bits (49), Expect = 2.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 749  AANTGNNKNRRPEDDSDESPH 687
            AANTG   ++ PE   D SP+
Sbjct: 1677 AANTGGGPDKIPETAEDISPY 1697


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 293  PLPGMQHGFQPGFQPGYQ 346
            PLP ++HG   GF  GY+
Sbjct: 1026 PLPELRHGDIQGFNVGYR 1043



 Score = 23.8 bits (49), Expect = 2.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 749  AANTGNNKNRRPEDDSDESPH 687
            AANTG   ++ PE   D SP+
Sbjct: 1673 AANTGGGPDKIPETAEDISPY 1693


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +2

Query: 359 PGYPQPSGYPVPVMQQPGPQAPGGWMNMPQG 451
           P  PQP   P P     GP  P   +  PQG
Sbjct: 24  PNVPQPGRRPFPTFPGQGPFNPK--IKWPQG 52


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +2

Query: 299 PGMQHGFQPGFQPGYQPGFAPGYP 370
           PGM HG QP    G   G A G P
Sbjct: 327 PGMGHGLQPPDLAGTSQGSA-GLP 349


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = +2

Query: 359 PGYPQPSGYPVPVMQQPGPQAP 424
           P  PQP   P P     GP  P
Sbjct: 10  PNVPQPGRRPFPTFPGQGPFNP 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,361
Number of Sequences: 438
Number of extensions: 5646
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)