Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_E06
(694 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 29 0.027
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 24 1.0
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 24 1.0
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 3.1
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 23 3.1
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 22 5.5
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 21 9.6
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 21 9.6
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 21 9.6
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 21 9.6
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 21 9.6
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 21 9.6
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 29.5 bits (63), Expect = 0.027
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +2
Query: 188 PAKXVEAAESNGKENGTDEAPEDSPAENGDAEESN-----DASENGDATEKKETGVKRKS 352
P K V E KE DEA E+ E G+ ++ + D E+ D KKE K+K+
Sbjct: 210 PIKLVVEKERE-KELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKT 268
Query: 353 V 355
+
Sbjct: 269 I 269
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 24.2 bits (50), Expect = 1.0
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 224 KENGTDEAPEDSPAENGDAEESNDASENGDATE 322
+E G DEA D EN A+E + GD +
Sbjct: 21 EEEGGDEATADELCENRPADEYFRLTTEGDCRD 53
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 24.2 bits (50), Expect = 1.0
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 224 KENGTDEAPEDSPAENGDAEESNDASENGDATE 322
+E G DEA D EN A+E + GD +
Sbjct: 21 EEEGGDEATADELCENRPADEYFRLTTEGDCRD 53
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = -3
Query: 356 PQISSSHQSLSFLWHHRSQMHRCFLRHHHFQQANLLG 246
P +++ + + HH + H + HH QQ + G
Sbjct: 155 PPLTTQSMNNHHMGHHMQEQHPQHHQPHHQQQHMMYG 191
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = -3
Query: 356 PQISSSHQSLSFLWHHRSQMHRCFLRHHHFQQANLLG 246
P +++ + + HH + H + HH QQ + G
Sbjct: 157 PPLTTQSMNNHHMGHHMQEQHPQHHQPHHQQQHMMYG 193
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 21.8 bits (44), Expect = 5.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1
Query: 538 CRSGICGCELNSN 500
C+ G+C E+NS+
Sbjct: 140 CKKGVCTMEINSD 152
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 377 LLFLHQEPQISSSHQSLSFL 318
+ F EP+ S HQ L+ L
Sbjct: 116 ITFYRDEPRFSQPHQILTLL 135
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 377 LLFLHQEPQISSSHQSLSFL 318
+ F EP+ S HQ L+ L
Sbjct: 276 ITFYRDEPRFSQPHQILTLL 295
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 377 LLFLHQEPQISSSHQSLSFL 318
+ F EP+ S HQ L+ L
Sbjct: 276 ITFYRDEPRFSQPHQILTLL 295
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/45 (20%), Positives = 19/45 (42%)
Frame = +3
Query: 462 IIYAWFTAMHQCPLEFNSHPHIPLLQMYYTHTDSLIL*RVELFCV 596
+++ + HQ L + LLQ+ + D +++F V
Sbjct: 295 LLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATRKEIDIFLV 339
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/45 (20%), Positives = 19/45 (42%)
Frame = +3
Query: 462 IIYAWFTAMHQCPLEFNSHPHIPLLQMYYTHTDSLIL*RVELFCV 596
+++ + HQ L + LLQ+ + D +++F V
Sbjct: 295 LLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATRKEIDIFLV 339
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/45 (20%), Positives = 19/45 (42%)
Frame = +3
Query: 462 IIYAWFTAMHQCPLEFNSHPHIPLLQMYYTHTDSLIL*RVELFCV 596
+++ + HQ L + LLQ+ + D +++F V
Sbjct: 295 LLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATRKEIDIFLV 339
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,827
Number of Sequences: 336
Number of extensions: 2399
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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