Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_E06
(694 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 32 0.090
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 31 0.12
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.21
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 30 0.28
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 30 0.36
SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1 re... 29 0.84
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 29 0.84
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 28 1.1
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 28 1.1
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 28 1.1
SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|ch... 28 1.5
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 27 1.9
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.6
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 27 3.4
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 27 3.4
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 27 3.4
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 3.4
SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|c... 27 3.4
SPBC354.15 |fap1||L-pipecolate oxidase|Schizosaccharomyces pombe... 27 3.4
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 26 4.5
SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosacchar... 26 4.5
SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces pom... 26 5.9
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 26 5.9
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 25 7.9
SPBC14C8.03 |fma2||methionine aminopeptidase Fma2 |Schizosacchar... 25 7.9
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 25 7.9
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 31.9 bits (69), Expect = 0.090
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 164 KASPVKQSPAKXVEAAES-NGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGV 340
KA PV++ P K + +++ NG+E T + E++ + G ++E N+A+ + + GV
Sbjct: 123 KARPVQEQPIKDRKKSKNKNGEEPETSTSVENAESAKGSSDE-NEANTATAPSSNEANGV 181
Query: 341 KRK 349
+K
Sbjct: 182 DKK 184
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 31.5 bits (68), Expect = 0.12
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 170 SPVKQSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDA 316
+P+K+ PAK ++ + A SPA NG N+AS + A
Sbjct: 113 TPLKRGPAKGFNRNADEKQKRASGSAKSSSPAVNGSVFSGNEASPSSRA 161
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 30.7 bits (66), Expect = 0.21
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 152 STEPKASPVKQSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESND-ASENGDATEKK 328
S+ +S +S + E+ E T+E E S + D+E S+D +SE+GD+
Sbjct: 166 SSSESSSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSS 225
Query: 329 ET 334
++
Sbjct: 226 DS 227
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 30.3 bits (65), Expect = 0.28
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 203 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGD 313
E++E + ++N TDEA ED+ + D + S + D
Sbjct: 355 ESSEDDDEDNNTDEANEDAQSNVSDESPKGEGSSHSD 391
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 29.9 bits (64), Expect = 0.36
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = +2
Query: 149 TSTEPKASPVKQSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKK 328
+ +E ++S + +ES G+D + S +E+ + E ND+S + +E +
Sbjct: 133 SDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESE 192
Query: 329 ET 334
+
Sbjct: 193 SS 194
Score = 29.9 bits (64), Expect = 0.36
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = +2
Query: 149 TSTEPKASPVKQSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKK 328
+ +E ++S + +ES G+D + S +E+ + E ND+S + +E +
Sbjct: 187 SDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESE 246
Query: 329 ET 334
+
Sbjct: 247 SS 248
Score = 28.7 bits (61), Expect = 0.84
Identities = 13/57 (22%), Positives = 33/57 (57%)
Frame = +2
Query: 149 TSTEPKASPVKQSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDAT 319
+S+E S S ++ +++ + + + ++ +DS +++ D+ ES +SE+ D+T
Sbjct: 247 SSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDS-ESESSSEDSDST 302
>SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1
related|Schizosaccharomyces pombe|chr 2|||Manual
Length = 773
Score = 28.7 bits (61), Expect = 0.84
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -1
Query: 664 QVLLQVKFNTQCIYYYINLNLNQTQKSSTLHSMRLSVWV*YICRSGICGC 515
++LL C ++ L+LN+ + L +R + ++ SGICGC
Sbjct: 93 KLLLDAFEKKGCDVHFYALDLNEAELQKGLQELRQTTNYQHVKVSGICGC 142
>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1428
Score = 28.7 bits (61), Expect = 0.84
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 164 KASPVKQSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKE 331
KA K + VE + NG + + ++ +DS ++ + ESND S + DA + +
Sbjct: 360 KALQQKLENERIVEEIKKNGIQEDS-QSTDDSSKDDDNNSESNDMSPHNDAETRAD 414
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 209 AESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVAL 361
+ES ++ DE E+ EN D + D +EN + + E G S A+
Sbjct: 241 SESYERDEDVDEEEEEDDDENNDEGDDEDENENDEL--RSENGSPNPSAAV 289
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 28.3 bits (60), Expect = 1.1
Identities = 21/74 (28%), Positives = 26/74 (35%)
Frame = +2
Query: 134 APXXVTSTEPKASPVKQSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGD 313
+P S + K K + E KE EA EE A N
Sbjct: 376 SPATSISVDEPQKDSKDDSEKVEKETEVERKEENEAEAEAVFDDWEAALEEPEVAENNEV 435
Query: 314 ATEKKETGVKRKSV 355
TEKKET +K +V
Sbjct: 436 VTEKKETDIKSDAV 449
Score = 26.2 bits (55), Expect = 4.5
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 146 VTSTEPKASPVKQSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEK 325
+++ E K PV + K + S+ +G E+ SPA + +E S++ +
Sbjct: 342 LSNGEKKQKPVYTNKKKSNRSGTSSISSSGILES---SPATSISVDEPQKDSKDDSEKVE 398
Query: 326 KETGVKRK 349
KET V+RK
Sbjct: 399 KETEVERK 406
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 224 KENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVAL 361
+EN +D E+S + AE A E TE++E K++ + L
Sbjct: 625 EENSSDNEMEESSGSSVTAENEESADEVDFQTEREENARKKEELRL 670
>SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 525
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 349 FPLHTSLFLFCGITVLRCIVAFFGITIFS 263
FP+ +F FC + IV+ G+TIF+
Sbjct: 398 FPIGIFMFAFCSKVHIHYIVSLIGLTIFN 426
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 27.5 bits (58), Expect = 1.9
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +2
Query: 152 STEPKASPVKQSPAKXVE-----AAESNGKENGTDEAPEDSPAENGDAEESNDASENGDA 316
S P+ SPV+ V+ +ESN K +GT+ + +P NG+ EE N+ G
Sbjct: 175 SFAPQKSPVENETETNVDNGDTKISESNEK-SGTEVEQQSAPNSNGN-EEVNNLEPVGQN 232
Query: 317 TEKKE 331
K+E
Sbjct: 233 ESKQE 237
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 146 VTSTEPKASPVKQSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENG 310
V++ EP+ PVK+ V ++ G+ + TD +P E + S + E G
Sbjct: 390 VSANEPQPRPVKED----VPKSQVGGETDTTDVINNSTPKEETEESPSTELPETG 440
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 146 VTSTEPKASPVKQSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASE---NGDA 316
+ ++ K+SPV + A +N + + +SP + EE+N A + A
Sbjct: 527 LANSNSKSSPVAVQRVSTLPQASANKQAKEMESKMSNSPTQKSKTEENNQAVRAILDASA 586
Query: 317 TEKKETGVKR 346
T +K+ + R
Sbjct: 587 TMEKQYDLHR 596
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 146 VTSTEPKASPVKQSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEK 325
V ++E S + S + E ES +DE+ +S +E+ ++EE +++ E D +E+
Sbjct: 75 VAASEDSESDSESSEEE--EETESEEDSEVSDESESESESES-ESEEESESEEESDESER 131
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = +2
Query: 203 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVALD 364
+A S+ +E ++E ED+ E+G +E + E+G+ ++ E +++ D
Sbjct: 954 DADPSDEEEEESEEYSEDASEEDGYSESEVEDEESGEDWDELERKARQEDAKHD 1007
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 152 STEPKASPVKQSPAKXVEAAESNGKENGTDEAPEDSPAEN-GDAEESNDASENGDAT 319
++EPK+ + +SP + + ++ T++ DS +N ++S DA + AT
Sbjct: 981 TSEPKSESLPKSPEEKSDDTSNDVTTENTNDINGDSNMDNVATVDKSTDAVDTSTAT 1037
>SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 329
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -3
Query: 314 HHRSQMHRCFLR--HHHFQQANLLGL--HRYHSLCHYFLQL 204
HH SQ ++C LR HH N +G H++ L ++L L
Sbjct: 111 HHCSQCNKCILRMDHHCMWFKNCVGFRNHKFFFLECFYLNL 151
>SPBC354.15 |fap1||L-pipecolate oxidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 588 RAQPFIV*GYQYGCNTFVGAGYVDVS*TLMGIDALQ 481
RA P ++ G N + + Y D MGIDAL+
Sbjct: 36 RAPPPVIDGSSVDANRIIRSDYADAVYCSMGIDALE 71
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 26.2 bits (55), Expect = 4.5
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 161 PKAS-PVKQSPAKXVEAAESNGKENGTDEAPEDSPAENG-DAEESNDASENGDAT-EKKE 331
PK+S P +PA V A +S NG E+ ENG D SND+ +G E+ E
Sbjct: 396 PKSSFPTSSTPAS-VGAEKSEETSNGNKSEQEEK--ENGNDETRSNDSLVSGKGKGEENE 452
Query: 332 TGV 340
V
Sbjct: 453 DSV 455
>SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 682
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 334 SLFLFCGITVLRCIVAFF-GITIFSRRIFWGFIGTILFA 221
++F + C+ FF G TI+ +F G +GT L A
Sbjct: 356 AVFFIFSLFFFLCMRNFFPGFTIYFPALFLGVVGTFLIA 394
>SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 329
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 242 EAPEDSPAENGDAEESNDASENGDATEK 325
E PEDS E+G +E + D SE+G+ E+
Sbjct: 235 EPPEDS--EDGISEMNEDPSESGEMIEQ 260
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 5.9
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Frame = +2
Query: 164 KASPVKQSPAKXVEAAESNGKENG-------TDEAPEDSPAENGDAEESNDA-SENGDAT 319
K +PV A VE AE NG E+ + E ED A+ + +A E +
Sbjct: 403 KPAPVVAPAAPTVE-AEVNGVEDSKKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKKEKK 461
Query: 320 EKKETGVKRK 349
EKKE K+K
Sbjct: 462 EKKEKKEKKK 471
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 257 SPAENGDAEESNDASENGDAT 319
SP NGD E +ENG+ T
Sbjct: 9 SPTTNGDKNEDGYPAENGEGT 29
>SPBC14C8.03 |fma2||methionine aminopeptidase Fma2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 251 EDSPAENGDAEESNDASENGDATEKKETGVKRKS 352
E+ E+ E NDA+E G + +K+ K+KS
Sbjct: 22 ENDVVEDDGKVEENDAAEEGASNGEKKKKKKKKS 55
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = +2
Query: 161 PKASPVKQSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENG 310
PKASP + +GK+NG P ++ + + D E G
Sbjct: 29 PKASPSQSQSPVNTSLHNGDGKDNGVATEPVENKQILSERSVTRDDYEKG 78
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,133,687
Number of Sequences: 5004
Number of extensions: 35709
Number of successful extensions: 174
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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