Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_E05
         (592 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   1.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   3.4  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   7.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.8  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 378 LSRNVH*TIAQERWCQQNAYKEW 446
           ++R +H      RWC QN  + W
Sbjct: 571 VARGIHAEALVPRWCYQNEGECW 593


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +1

Query: 346 KFMPAGLMFCLSV-GMFT 396
           KF P+ L FCL++  +FT
Sbjct: 311 KFRPSSLRFCLNILSIFT 328


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +1

Query: 346 KFMPAGLMFCLSV-GMFT 396
           KF P+ L FCL++  +FT
Sbjct: 36  KFRPSSLRFCLNILSIFT 53


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 334 YNSRKFMPAGLMFCLSVGMFTKLLLKNV 417
           Y  RK     L  CLSVGM  + ++  V
Sbjct: 235 YMRRKCQECRLKKCLSVGMRPECVVPEV 262


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -3

Query: 425 LAPTFLSNSLVNIPTERQNIRPAGMNF 345
           + PT+  NS+  +     N  P G +F
Sbjct: 23  MTPTYSMNSMSCVSMPSMNCSPQGASF 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,804
Number of Sequences: 336
Number of extensions: 2195
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)