Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_E03
         (786 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056...    30   2.4  
04_04_0582 + 26369537-26369914,26371598-26371887,26371985-263721...    29   4.2  
10_08_0489 + 18269824-18270270,18271659-18271948,18272341-182725...    29   5.5  
09_06_0064 + 20627265-20627538,20628062-20628274,20628772-206288...    28   9.7  

>07_03_1710 -
           28903614-28903673,28904982-28905146,28905453-28905638,
           28905784-28905927,28906281-28906460,28906559-28907215
          Length = 463

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 79  TKCGNGTYKRERYRG-EKLFGHAEGLAGNRI 168
           ++CG   Y R+  RG + LFGHA+G    RI
Sbjct: 139 SRCGGRDYWRQFMRGLDYLFGHADGYGERRI 169


>04_04_0582 +
           26369537-26369914,26371598-26371887,26371985-26372156,
           26372271-26372393,26372499-26372627,26372785-26372979,
           26373128-26373214,26373296-26373568,26374166-26374273,
           26374363-26374686
          Length = 692

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
 Frame = +2

Query: 197 YSYETLVETANFLLSRISEKPNIGIICGSGMGSLAESITDGVRIPYEDIP----NFPIST 364
           Y+  T+VE+    ++ +     +GII G+G+  +   ++   R+PY DIP     +P+  
Sbjct: 518 YASVTVVESLMMAIASVIPNFLMGIIIGAGIQGIFMLVSGYFRLPY-DIPKPVWRYPMQY 576

Query: 365 VEGHHGQL 388
           +  H+  L
Sbjct: 577 ISFHYWAL 584


>10_08_0489 +
           18269824-18270270,18271659-18271948,18272341-18272512,
           18272608-18272730,18272832-18272960,18273061-18273255,
           18273384-18273470,18273563-18273835,18274047-18274154,
           18274769-18275116
          Length = 723

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = +2

Query: 197 YSYETLVETANFLLSRISEKPNIGIICGSGMGSLAESITDGVRIPYEDIP----NFPIST 364
           Y+  T+VE+    ++ +     +GII G+G+  +   ++   R+P+ DIP     +P+S 
Sbjct: 541 YASVTVVESLMMAIASVIPNFLMGIIIGAGIQGIFMLVSGYFRLPH-DIPKPFWRYPMSY 599

Query: 365 VEGHHGQL 388
           +  H+  L
Sbjct: 600 ISFHYWAL 607


>09_06_0064 +
           20627265-20627538,20628062-20628274,20628772-20628827,
           20629417-20629533,20629701-20629820,20629910-20630004,
           20630092-20630185,20630406-20630537,20631190-20631302,
           20631423-20631657,20631950-20632028,20632029-20632161,
           20632780-20632821,20632902-20632950,20633443-20633525,
           20633686-20633802,20633893-20633956,20634334-20634486,
           20635043-20635126,20635207-20635401,20635507-20635578,
           20635599-20635610
          Length = 843

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 20/89 (22%), Positives = 33/89 (37%)
 Frame = -1

Query: 273 MMPMFGFSDILDSKKFAVSTNVS*EYPVFSFPLQSDPISGKTFCVTKQFFSTISFAFIGA 94
           M+P  G    LD    A+  N+    P    P QSD IS     +       + F+    
Sbjct: 46  MLPRSGSRPQLDLSGAAIHGNLEDRNPTILLPNQSDDISHLALDIGGSLIKLVYFSRHAE 105

Query: 93  ITTLSYRKIKAKNK*NDVQCPMSELPIIG 7
            ++   RK+  K +   +       P++G
Sbjct: 106 HSSEDKRKLSTKRRLGMLNGGRRSYPVLG 134


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,434,712
Number of Sequences: 37544
Number of extensions: 485682
Number of successful extensions: 1087
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)