Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_D24
(503 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q95V82 Cluster: Cytochrome c oxidase subunit Va; n=2; N... 199 3e-50
UniRef50_Q94514 Cluster: Cytochrome c oxidase subunit 5A, mitoch... 171 8e-42
UniRef50_UPI0000D56796 Cluster: PREDICTED: similar to Cytochrome... 163 2e-39
UniRef50_P20674 Cluster: Cytochrome c oxidase subunit 5A, mitoch... 138 9e-32
UniRef50_P55954 Cluster: Cytochrome c oxidase subunit 5A, mitoch... 131 8e-30
UniRef50_Q4S8B4 Cluster: Chromosome undetermined SCAF14706, whol... 92 7e-18
UniRef50_Q5DBT0 Cluster: SJCHGC09063 protein; n=1; Schistosoma j... 88 1e-16
UniRef50_O61694 Cluster: Cytochrome c oxidase subunit 5A, mitoch... 86 5e-16
UniRef50_UPI0000D9BC37 Cluster: PREDICTED: similar to Cytochrome... 79 7e-14
UniRef50_Q01359 Cluster: Cytochrome c oxidase polypeptide VI, mi... 69 8e-11
UniRef50_Q9UTF6 Cluster: Cytochrome c oxidase polypeptide VI, mi... 64 2e-09
UniRef50_P00427 Cluster: Cytochrome c oxidase polypeptide VI, mi... 63 4e-09
UniRef50_A1D039 Cluster: Cytochrome c oxidase subunit Va, putati... 58 1e-07
UniRef50_A2X9I7 Cluster: Putative uncharacterized protein; n=3; ... 36 0.52
UniRef50_UPI000049A138 Cluster: Importin beta family protein; n=... 33 4.8
>UniRef50_Q95V82 Cluster: Cytochrome c oxidase subunit Va; n=2;
Neoptera|Rep: Cytochrome c oxidase subunit Va -
Rhyzopertha dominica (Lesser grain borer)
Length = 150
Score = 199 bits (485), Expect = 3e-50
Identities = 89/117 (76%), Positives = 100/117 (85%)
Frame = +1
Query: 142 GGPVESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVXDY 321
G VE+DE+FD RYE YFNR DIDGWE+RKGMND+CG D+VP+PKI+ AAL ACRRV DY
Sbjct: 31 GHNVETDEQFDARYENYFNRPDIDGWEVRKGMNDICGEDVVPEPKIVIAALKACRRVNDY 90
Query: 322 ALAVXFIEACKDKCGNKVNEIYPYXIQEIXPTLXELGIDXPEELGYDKPQLALESVY 492
ALAV FIEA KDKCG KV EIYPY IQEI PTL ELGID PEELGYDKP+LAL+++Y
Sbjct: 91 ALAVRFIEAIKDKCGGKVAEIYPYIIQEIRPTLTELGIDTPEELGYDKPELALQNIY 147
>UniRef50_Q94514 Cluster: Cytochrome c oxidase subunit 5A,
mitochondrial precursor; n=11; Neoptera|Rep: Cytochrome
c oxidase subunit 5A, mitochondrial precursor -
Drosophila melanogaster (Fruit fly)
Length = 149
Score = 171 bits (416), Expect = 8e-42
Identities = 78/116 (67%), Positives = 92/116 (79%)
Frame = +1
Query: 145 GPVESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVXDYA 324
G ES EEFD RYE YF+R+ IDGWEIRKGMNDL GMDLVP PKII+A L A RRV D A
Sbjct: 32 GTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIA 91
Query: 325 LAVXFIEACKDKCGNKVNEIYPYXIQEIXPTLXELGIDXPEELGYDKPQLALESVY 492
LA+ ++E CKDKCG++ +YPY +++I PTL ELGI EELGYDKP+LAL+SVY
Sbjct: 92 LAIRWLEGCKDKCGDQKATLYPYLLEKITPTLQELGIPTIEELGYDKPELALKSVY 147
>UniRef50_UPI0000D56796 Cluster: PREDICTED: similar to Cytochrome c
oxidase polypeptide Va, mitochondrial precursor; n=2;
Tribolium castaneum|Rep: PREDICTED: similar to
Cytochrome c oxidase polypeptide Va, mitochondrial
precursor - Tribolium castaneum
Length = 152
Score = 163 bits (396), Expect = 2e-39
Identities = 71/111 (63%), Positives = 88/111 (79%)
Frame = +1
Query: 160 DEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVXDYALAVXF 339
D++ RYE +F+R+DIDGW+IR+GMNDL G D VP+P +I AALHACRRV DYA+ V F
Sbjct: 41 DDDLTCRYECFFSREDIDGWDIRQGMNDLLGYDAVPEPPVIIAALHACRRVNDYAMTVRF 100
Query: 340 IEACKDKCGNKVNEIYPYXIQEIXPTLXELGIDXPEELGYDKPQLALESVY 492
+EA KD+CG+K NEIYPY +QEI PTL ELG D PE L Y KP+L L+SV+
Sbjct: 101 LEAIKDRCGDKANEIYPYIVQEIAPTLCELGCDLPETLCYHKPELFLKSVF 151
>UniRef50_P20674 Cluster: Cytochrome c oxidase subunit 5A,
mitochondrial precursor; n=45; Eumetazoa|Rep: Cytochrome
c oxidase subunit 5A, mitochondrial precursor - Homo
sapiens (Human)
Length = 150
Score = 138 bits (333), Expect = 9e-32
Identities = 65/107 (60%), Positives = 76/107 (71%)
Frame = +1
Query: 145 GPVESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVXDYA 324
G E+DEEFD R+ YFN+ DID WE+RKG+N L D+VP+PKII AAL ACRR+ D+A
Sbjct: 44 GSQETDEEFDARWVTYFNKPDIDAWELRKGINTLVTYDMVPEPKIIDAALRACRRLNDFA 103
Query: 325 LAVXFIEACKDKCGNKVNEIYPYXIQEIXPTLXELGIDXPEELGYDK 465
V +E KDK G EIYPY IQE+ PTL ELGI PEELG DK
Sbjct: 104 SLVRILEVVKDKAGPH-KEIYPYVIQELRPTLNELGISTPEELGLDK 149
>UniRef50_P55954 Cluster: Cytochrome c oxidase subunit 5A,
mitochondrial precursor; n=2; Caenorhabditis|Rep:
Cytochrome c oxidase subunit 5A, mitochondrial precursor
- Caenorhabditis elegans
Length = 174
Score = 131 bits (317), Expect = 8e-30
Identities = 55/105 (52%), Positives = 79/105 (75%), Gaps = 2/105 (1%)
Frame = +1
Query: 163 EEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVXDYALAVXFI 342
++FDN + Y NR +IDGWE+RK +++L D++PDPK+++AAL ACRRV D+ALAV F+
Sbjct: 42 DKFDNHFINYLNRPEIDGWEVRKALSELHDYDVIPDPKVVEAALRACRRVNDFALAVRFL 101
Query: 343 EACKDKCGNKVNE--IYPYXIQEIXPTLXELGIDXPEELGYDKPQ 471
EA K KCG + N +Y Y ++++ P L ELGID PE+LGY +P+
Sbjct: 102 EAIKIKCGAQKNRDTVYAYIVKQVEPVLKELGIDTPEQLGYGEPE 146
>UniRef50_Q4S8B4 Cluster: Chromosome undetermined SCAF14706, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14706,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 149
Score = 91.9 bits (218), Expect = 7e-18
Identities = 42/82 (51%), Positives = 55/82 (67%)
Frame = +1
Query: 145 GPVESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVXDYA 324
G VE++EEFD R+ YF++ DID WE+RKGMN L G DLVP+ KII +AL ACRR+ D A
Sbjct: 12 GKVETEEEFDARWVTYFSKPDIDTWELRKGMNTLIGYDLVPEAKIIDSALRACRRLNDLA 71
Query: 325 LAVXFIEACKDKCGNKVNEIYP 390
A+ +EA K + +P
Sbjct: 72 SAIRILEAVKVRLRPSAGGCFP 93
>UniRef50_Q5DBT0 Cluster: SJCHGC09063 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09063 protein - Schistosoma
japonicum (Blood fluke)
Length = 150
Score = 87.8 bits (208), Expect = 1e-16
Identities = 45/114 (39%), Positives = 65/114 (57%)
Frame = +1
Query: 139 HGGPVESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVXD 318
+ E E F +R+ F+ IDGW R M L D +P P+++ + L ACRR+ D
Sbjct: 33 YSNKTEPYEIFKSRFMKAFDDPKIDGWWARTWMQRLHLEDAIPPPEVVVSGLKACRRLND 92
Query: 319 YALAVXFIEACKDKCGNKVNEIYPYXIQEIXPTLXELGIDXPEELGYDKPQLAL 480
ALA+ FIE+ K KC + + +EI P + ELG+ E+LGYDKP+LA+
Sbjct: 93 IALAIRFIESVKFKC-QACKGSWNWLSKEIEPAMKELGLPTLEQLGYDKPELAI 145
>UniRef50_O61694 Cluster: Cytochrome c oxidase subunit 5A,
mitochondrial precursor; n=1; Manduca sexta|Rep:
Cytochrome c oxidase subunit 5A, mitochondrial precursor
- Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
Length = 63
Score = 85.8 bits (203), Expect = 5e-16
Identities = 42/63 (66%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = +1
Query: 46 MLKSASGAFANVLKXXXXXXXXXXXXX-XXXXHGGPVESDEEFDNRYEAYFNRKDIDGWE 222
MLKSASGA ANVLK HGGPVESDEEFD+RYEA+FNRKDIDGWE
Sbjct: 1 MLKSASGALANVLKRSLVPAARVTAVVPLRRSHGGPVESDEEFDSRYEAFFNRKDIDGWE 60
Query: 223 IRK 231
IRK
Sbjct: 61 IRK 63
>UniRef50_UPI0000D9BC37 Cluster: PREDICTED: similar to Cytochrome c
oxidase polypeptide Va, mitochondrial precursor; n=2;
Amniota|Rep: PREDICTED: similar to Cytochrome c oxidase
polypeptide Va, mitochondrial precursor - Macaca mulatta
Length = 171
Score = 78.6 bits (185), Expect = 7e-14
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +1
Query: 145 GPVESDEEFDNRYEAYFNRKDIDGWEIRKGMND-LCGMDLVPDPKIIKAALHACRRVXDY 321
G E++EEFD R+ Y N+ DID WE+ KGMN+ L DLVP+PKII AL CRR+ D+
Sbjct: 102 GSHETNEEFDARWVTYTNKPDIDAWELHKGMNNTLVSYDLVPEPKIIDVALWPCRRLNDF 161
Query: 322 ALAVXFIE 345
A AV +E
Sbjct: 162 ASAVRILE 169
>UniRef50_Q01359 Cluster: Cytochrome c oxidase polypeptide VI,
mitochondrial precursor; n=12; Dikarya|Rep: Cytochrome c
oxidase polypeptide VI, mitochondrial precursor -
Neurospora crassa
Length = 148
Score = 68.5 bits (160), Expect = 8e-11
Identities = 40/100 (40%), Positives = 54/100 (54%)
Frame = +1
Query: 154 ESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVXDYALAV 333
E+ EEF RYE F+ D +E+++ +N+ DLVP P ++ AAL A RRV D+ AV
Sbjct: 46 ETFEEFTARYEKEFDAVQ-DVFELQRNLNNAFAYDLVPSPSVLAAALKAARRVNDFPTAV 104
Query: 334 XFIEACKDKCGNKVNEIYPYXIQEIXPTLXELGIDXPEEL 453
E K K NK Y + E+ P ELGI E+L
Sbjct: 105 RVFEGIKAKVENKGQ--YEQYLAELKPLREELGITLKEDL 142
>UniRef50_Q9UTF6 Cluster: Cytochrome c oxidase polypeptide VI,
mitochondrial precursor; n=1; Schizosaccharomyces
pombe|Rep: Cytochrome c oxidase polypeptide VI,
mitochondrial precursor - Schizosaccharomyces pombe
(Fission yeast)
Length = 140
Score = 64.1 bits (149), Expect = 2e-09
Identities = 35/97 (36%), Positives = 53/97 (54%)
Frame = +1
Query: 163 EEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVXDYALAVXFI 342
EE + +Y +F+ D +E+++G+N+ D+VP +I+ AL A RRV D+ AV
Sbjct: 45 EEINTKYNDFFSNVQ-DQFELQRGLNNCFAYDIVPSSDVIEQALRAARRVNDFPTAVRIF 103
Query: 343 EACKDKCGNKVNEIYPYXIQEIXPTLXELGIDXPEEL 453
E K K K E Y ++E+ P ELGI E+L
Sbjct: 104 EGIKVKLPTK--EQYQAYVKELKPVCNELGIVLKEDL 138
>UniRef50_P00427 Cluster: Cytochrome c oxidase polypeptide VI,
mitochondrial precursor; n=9; Ascomycota|Rep: Cytochrome
c oxidase polypeptide VI, mitochondrial precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 148
Score = 62.9 bits (146), Expect = 4e-09
Identities = 38/100 (38%), Positives = 54/100 (54%)
Frame = +1
Query: 154 ESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVXDYALAV 333
E+ EEF RYE F+ D +E+++ +N+ DLVP P +I+ AL A RRV D A+
Sbjct: 47 ETFEEFTARYEKEFDEA-YDLFEVQRVLNNCFSYDLVPAPAVIEKALRAARRVNDLPTAI 105
Query: 334 XFIEACKDKCGNKVNEIYPYXIQEIXPTLXELGIDXPEEL 453
EA K K N+ + Y + E+ ELG+ EEL
Sbjct: 106 RVFEALKYKVENE--DQYKAYLDELKDVRQELGVPLKEEL 143
>UniRef50_A1D039 Cluster: Cytochrome c oxidase subunit Va, putative;
n=5; Ascomycota|Rep: Cytochrome c oxidase subunit Va,
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 158
Score = 58.0 bits (134), Expect = 1e-07
Identities = 34/100 (34%), Positives = 53/100 (53%)
Frame = +1
Query: 154 ESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVXDYALAV 333
E+ EEF R+E F+ D +E+++ +N+ DLVP +++ AAL A RRV D+ AV
Sbjct: 57 ETYEEFSARFEKEFDGVQ-DVFELQRNLNNCFAYDLVPSVEVLSAALRAARRVNDFPTAV 115
Query: 334 XFIEACKDKCGNKVNEIYPYXIQEIXPTLXELGIDXPEEL 453
E K K + + Y ++ + ELG+ EEL
Sbjct: 116 RIFEGIKAKV--ETQDQYKQYLESLEGLRQELGVALREEL 153
>UniRef50_A2X9I7 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 135
Score = 35.9 bits (79), Expect = 0.52
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 137 HTEVQWKVMKNSITDMKHISTEKTLMVGKSAKE*MTSVVW-ISFPTQRLSKLP--FMHA 304
H +++WK ++ KH TEK L G S E TS W + Q + KL +MHA
Sbjct: 71 HYQLRWKGKLSTSGSCKHSETEKLLYRGLSKSERYTSTFWMVCMDNQSIKKLDNNYMHA 129
>UniRef50_UPI000049A138 Cluster: Importin beta family protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: Importin beta
family protein - Entamoeba histolytica HM-1:IMSS
Length = 1097
Score = 32.7 bits (71), Expect = 4.8
Identities = 15/67 (22%), Positives = 32/67 (47%)
Frame = -3
Query: 342 YKPDCKGIIXDSSACMKGSFDNLWVGNEIHTTEVIHSFADFPTINVFSVEICFISVIEFF 163
+K CK + +K SF + ++ N+I ++I SF D ++ + +S+++
Sbjct: 422 FKKKCKSYVSQIFQVIKQSFSDAFIPNQISGCDIISSFIDVELVSQSEFQEVLMSMLQSL 481
Query: 162 ITFHWTS 142
F T+
Sbjct: 482 TNFITTA 488
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,848,545
Number of Sequences: 1657284
Number of extensions: 8697828
Number of successful extensions: 19404
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19394
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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