Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_D24
         (503 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   3.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   3.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.3  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.3  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.3  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.3  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 402 LNXVWVDFIHFVSTFVFAGFYKPDCKGIIXDSS 304
           +  +WV  I+  +T++   F K  CK +I   S
Sbjct: 129 MTGIWVWLINISATYICYAFGKFSCKVMIQSVS 161


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 402 LNXVWVDFIHFVSTFVFAGFYKPDCKGIIXDSS 304
           +  +WV  I+  +T++   F K  CK +I   S
Sbjct: 362 MTGIWVWLINISATYICYAFGKFSCKVMIQSVS 394


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 402 LNXVWVDFIHFVSTFVFAGFYKPDCKGIIXDSS 304
           +  +WV  I+  +T++   F K  CK +I   S
Sbjct: 362 MTGIWVWLINISATYICYAFGKFSCKVMIQSVS 394


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 186 FISVIEFFITFHWTSV*SPYRYG 118
           F++V    I F W S  S +RYG
Sbjct: 575 FLNVSSIPIYFKWLSFLSWFRYG 597


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 186 FISVIEFFITFHWTSV*SPYRYG 118
           F++V    I F W S  S +RYG
Sbjct: 575 FLNVSSIPIYFKWLSFLSWFRYG 597


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 10/33 (30%), Positives = 12/33 (36%)
 Frame = +1

Query: 373 VNEIYPYXIQEIXPTLXELGIDXPEELGYDKPQ 471
           VNE  PY      PT     +    +  Y  PQ
Sbjct: 324 VNEAQPYVRNTTVPTQGVARMSRGRQYNYPNPQ 356


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 162 ITFHWTSV*SPYRY 121
           ITF WTS+   Y Y
Sbjct: 79  ITFGWTSIPMLYAY 92


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 162 ITFHWTSV*SPYRY 121
           ITF WTS+   Y Y
Sbjct: 79  ITFGWTSIPMLYAY 92


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 162 ITFHWTSV*SPYRY 121
           ITF WTS+   Y Y
Sbjct: 79  ITFGWTSIPMLYAY 92


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 10/33 (30%), Positives = 12/33 (36%)
 Frame = +1

Query: 373 VNEIYPYXIQEIXPTLXELGIDXPEELGYDKPQ 471
           VNE  PY      PT     +    +  Y  PQ
Sbjct: 272 VNEAQPYVRNTTVPTQGVARMSRGRQYNYPNPQ 304


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,486
Number of Sequences: 336
Number of extensions: 2187
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)