Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_D24
         (503 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09065-1|CAA70286.1|  149|Drosophila melanogaster cytochrome c o...   171   6e-43
BT011037-1|AAR30197.1|  149|Drosophila melanogaster RE42582p pro...   170   8e-43
AE014297-1390|AAN13534.1|  149|Drosophila melanogaster CG14724-P...   170   8e-43
AE014297-1389|AAF54706.1|  149|Drosophila melanogaster CG14724-P...   170   8e-43
BT029108-1|ABJ17041.1|  327|Drosophila melanogaster IP14812p pro...    28   6.2  
AY157148-1|AAN71718.1|  285|Drosophila melanogaster small conduc...    28   6.2  
AE014298-730|AAS65264.1|  924|Drosophila melanogaster CG10706-PF...    28   6.2  

>Y09065-1|CAA70286.1|  149|Drosophila melanogaster cytochrome c
           oxidase subunit Vapreprotein protein.
          Length = 149

 Score =  171 bits (415), Expect = 6e-43
 Identities = 78/116 (67%), Positives = 93/116 (80%)
 Frame = +1

Query: 145 GPVESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVXDYA 324
           G  ES EEFD RYE YF+R+ IDGWEIRKGMNDL GMDLVP+PKII+A L A RRV D A
Sbjct: 32  GTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPNPKIIEAGLRASRRVNDIA 91

Query: 325 LAVXFIEACKDKCGNKVNEIYPYXIQEIXPTLXELGIDXPEELGYDKPQLALESVY 492
           LA+ ++E CKDKCG++   +YPY +++I PTL ELGI   EELGYDKP+LAL+SVY
Sbjct: 92  LAIRWLEGCKDKCGDQKATLYPYLLEKITPTLQELGIPTIEELGYDKPELALKSVY 147


>BT011037-1|AAR30197.1|  149|Drosophila melanogaster RE42582p
           protein.
          Length = 149

 Score =  170 bits (414), Expect = 8e-43
 Identities = 78/116 (67%), Positives = 92/116 (79%)
 Frame = +1

Query: 145 GPVESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVXDYA 324
           G  ES EEFD RYE YF+R+ IDGWEIRKGMNDL GMDLVP PKII+A L A RRV D A
Sbjct: 32  GTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIA 91

Query: 325 LAVXFIEACKDKCGNKVNEIYPYXIQEIXPTLXELGIDXPEELGYDKPQLALESVY 492
           LA+ ++E CKDKCG++   +YPY +++I PTL ELGI   EELGYDKP+LAL+SVY
Sbjct: 92  LAIRWLEGCKDKCGDQKATLYPYLLEKITPTLQELGIPTIEELGYDKPELALKSVY 147


>AE014297-1390|AAN13534.1|  149|Drosophila melanogaster CG14724-PB,
           isoform B protein.
          Length = 149

 Score =  170 bits (414), Expect = 8e-43
 Identities = 78/116 (67%), Positives = 92/116 (79%)
 Frame = +1

Query: 145 GPVESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVXDYA 324
           G  ES EEFD RYE YF+R+ IDGWEIRKGMNDL GMDLVP PKII+A L A RRV D A
Sbjct: 32  GTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIA 91

Query: 325 LAVXFIEACKDKCGNKVNEIYPYXIQEIXPTLXELGIDXPEELGYDKPQLALESVY 492
           LA+ ++E CKDKCG++   +YPY +++I PTL ELGI   EELGYDKP+LAL+SVY
Sbjct: 92  LAIRWLEGCKDKCGDQKATLYPYLLEKITPTLQELGIPTIEELGYDKPELALKSVY 147


>AE014297-1389|AAF54706.1|  149|Drosophila melanogaster CG14724-PA,
           isoform A protein.
          Length = 149

 Score =  170 bits (414), Expect = 8e-43
 Identities = 78/116 (67%), Positives = 92/116 (79%)
 Frame = +1

Query: 145 GPVESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVXDYA 324
           G  ES EEFD RYE YF+R+ IDGWEIRKGMNDL GMDLVP PKII+A L A RRV D A
Sbjct: 32  GTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIA 91

Query: 325 LAVXFIEACKDKCGNKVNEIYPYXIQEIXPTLXELGIDXPEELGYDKPQLALESVY 492
           LA+ ++E CKDKCG++   +YPY +++I PTL ELGI   EELGYDKP+LAL+SVY
Sbjct: 92  LAIRWLEGCKDKCGDQKATLYPYLLEKITPTLQELGIPTIEELGYDKPELALKSVY 147


>BT029108-1|ABJ17041.1|  327|Drosophila melanogaster IP14812p
           protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -3

Query: 495 VVNTF*SELWLIVAKLLRXVNTQFGESRXDLLNXVWVDFIHFVS 364
           V+  F   LW+I +  LR       E   +LLN +W+  I F+S
Sbjct: 263 VLLVFMVSLWIIASWTLRQCERFHDEEHANLLNAMWLIAITFLS 306


>AY157148-1|AAN71718.1|  285|Drosophila melanogaster small
           conductance calcium-activatedpotassium channel SK splice
           variant 6b protein.
          Length = 285

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -3

Query: 495 VVNTF*SELWLIVAKLLRXVNTQFGESRXDLLNXVWVDFIHFVS 364
           V+  F   LW+I +  LR       E   +LLN +W+  I F+S
Sbjct: 184 VLLVFMVSLWIIASWTLRQCERFHDEEHANLLNAMWLIAITFLS 227


>AE014298-730|AAS65264.1|  924|Drosophila melanogaster CG10706-PF,
           isoform F protein.
          Length = 924

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -3

Query: 495 VVNTF*SELWLIVAKLLRXVNTQFGESRXDLLNXVWVDFIHFVS 364
           V+  F   LW+I +  LR       E   +LLN +W+  I F+S
Sbjct: 663 VLLVFMVSLWIIASWTLRQCERFHDEEHANLLNAMWLIAITFLS 706


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,340,768
Number of Sequences: 53049
Number of extensions: 412043
Number of successful extensions: 834
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)