Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_D20
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48585-4|CAA88480.1|  476|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U23449-5|AAC24296.2|  365|Caenorhabditis elegans Hypothetical pr...    27   10.0 

>Z48585-4|CAA88480.1|  476|Caenorhabditis elegans Hypothetical
           protein ZK673.4 protein.
          Length = 476

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 102 CGFI*KXCNQSSHTFPXLAYMRRYHKHDLEEI 7
           C +I K   Q S T+P + +M+R H ++  E+
Sbjct: 36  CNYIGKRGQQGS-TYPQIKHMKRLHPNEFAEV 66


>U23449-5|AAC24296.2|  365|Caenorhabditis elegans Hypothetical
           protein K06A1.1 protein.
          Length = 365

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +2

Query: 92  INPHHPRF*QPI*LSVTNHLGLLIL*REHHGNLLVAAAIRRVQL 223
           + P+ PR   PI  SV  HL    L     GN+ ++A +  V+L
Sbjct: 303 LTPYFPRNMLPIDPSVQQHLSHFTLMTHGFGNVAMSAVLESVKL 346


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,502,005
Number of Sequences: 27780
Number of extensions: 248519
Number of successful extensions: 524
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)