SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_D14
         (803 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0FDQ7 Cluster: Putative uncharacterized protein; n=3; ...   254   2e-66
UniRef50_Q7QI12 Cluster: ENSANGP00000018748; n=1; Anopheles gamb...   122   8e-27
UniRef50_Q4QPX9 Cluster: IP05651p; n=3; Sophophora|Rep: IP05651p...   122   1e-26
UniRef50_Q7PSX2 Cluster: ENSANGP00000018625; n=2; Culicidae|Rep:...   120   4e-26
UniRef50_UPI00015B56F3 Cluster: PREDICTED: hypothetical protein;...   115   2e-24
UniRef50_UPI0000DB7553 Cluster: PREDICTED: similar to CG15449-PA...    97   3e-19
UniRef50_Q9W399 Cluster: CG7267-PB; n=2; Sophophora|Rep: CG7267-...    73   1e-11
UniRef50_Q9VW87 Cluster: CG6981-PA, isoform A; n=6; Endopterygot...    41   0.042
UniRef50_A6FXM6 Cluster: ATP-dependent DNA helicase, UvrD/REP fa...    38   0.39 
UniRef50_UPI0000D610DB Cluster: Protein FAM77A.; n=1; Homo sapie...    35   2.8  
UniRef50_A2Q5Z5 Cluster: Putative uncharacterized protein; n=1; ...    35   2.8  
UniRef50_UPI000023E153 Cluster: predicted protein; n=1; Gibberel...    34   3.6  
UniRef50_Q4X706 Cluster: Putative uncharacterized protein; n=1; ...    34   3.6  
UniRef50_Q2FU28 Cluster: Putative uncharacterized protein; n=1; ...    34   3.6  
UniRef50_Q0YPF6 Cluster: Amino acid permease family protein; n=1...    34   4.8  
UniRef50_A4BJN0 Cluster: Putative uncharacterized protein; n=1; ...    34   4.8  
UniRef50_A2RAD1 Cluster: Contig An18c0080, complete genome. prec...    34   4.8  
UniRef50_Q5QUC0 Cluster: Signaling protein with a MHYT sensor do...    33   6.4  
UniRef50_A6CSI6 Cluster: Spore germination protein; n=1; Bacillu...    33   6.4  
UniRef50_UPI0000DAE593 Cluster: hypothetical protein Rgryl_01000...    33   8.4  
UniRef50_Q8ILJ8 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  

>UniRef50_A0FDQ7 Cluster: Putative uncharacterized protein; n=3;
           Endopterygota|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 126

 Score =  254 bits (622), Expect = 2e-66
 Identities = 125/126 (99%), Positives = 125/126 (99%)
 Frame = +1

Query: 88  MAISRLSIIKFLELALTCSCVALHYHSYNVDADIGMLVTGTFVGYLIIFAGAAAGYIMQT 267
           MAISRLSIIKFLELALTCSCVALHYHSYN DADIGMLVTGTFVGYLIIFAGAAAGYIMQT
Sbjct: 1   MAISRLSIIKFLELALTCSCVALHYHSYNADADIGMLVTGTFVGYLIIFAGAAAGYIMQT 60

Query: 268 PSHKRIDIFYSLVGVALFVASGAIIIDRFQHYGKSEIKDKNLAKASLAIINGAILLVDAV 447
           PSHKRIDIFYSLVGVALFVASGAIIIDRFQHYGKSEIKDKNLAKASLAIINGAILLVDAV
Sbjct: 61  PSHKRIDIFYSLVGVALFVASGAIIIDRFQHYGKSEIKDKNLAKASLAIINGAILLVDAV 120

Query: 448 LTQRGG 465
           LTQRGG
Sbjct: 121 LTQRGG 126


>UniRef50_Q7QI12 Cluster: ENSANGP00000018748; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000018748 - Anopheles gambiae
           str. PEST
          Length = 129

 Score =  122 bits (295), Expect = 8e-27
 Identities = 57/125 (45%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
 Frame = +1

Query: 88  MAISRLSIIKFLELALTCSCVALHYHSYNVDADIGMLVT-GTFVGYLIIFAGAAAGYIMQ 264
           MA+SRLSI+KFLELAL  +CV LHY S     DI  L++ GTFVGY +I     AGY++ 
Sbjct: 4   MAVSRLSIVKFLELALAITCVILHYKSLGERDDITKLLSAGTFVGYSVILIALFAGYMLS 63

Query: 265 TPSHKRIDIFYSLVGVALFVASGAIIIDRFQHYGKSEIKDKNLAKASLAIINGAILLVDA 444
            P +K++D+F+SL+G A+F+ASG +I+  +++   ++ K   ++K SLA+ NG +   DA
Sbjct: 64  NPINKKLDLFFSLIGCAMFIASGVLILKEWENAWNTDTKKIGISKGSLAVTNGVLFFFDA 123

Query: 445 VLTQR 459
           + T R
Sbjct: 124 IFTLR 128


>UniRef50_Q4QPX9 Cluster: IP05651p; n=3; Sophophora|Rep: IP05651p -
           Drosophila melanogaster (Fruit fly)
          Length = 172

 Score =  122 bits (293), Expect = 1e-26
 Identities = 59/122 (48%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
 Frame = +1

Query: 100 RLSIIKFLELALTCSCVALHYHSYNVDADI--GMLVTGTFVGYLIIFAGAAAGYIMQTPS 273
           RL+++KFLEL    +C+ LH++S+N D DI    L TGTF GY+I+  G  AG +M+ P 
Sbjct: 50  RLNVVKFLELGFAVACLVLHFYSFN-DRDIMTSFLATGTFTGYIIVVIGVFAGVLMRAPI 108

Query: 274 HKRIDIFYSLVGVALFVASGAIIIDRFQHYGKSEIKDKNLAKASLAIINGAILLVDAVLT 453
           HKRIDIF+S++G  LFVASG  II+ ++   ++  +D  L KASL+I+NG +   DAV T
Sbjct: 109 HKRIDIFFSVLGCTLFVASGVFIIEAWEFSFRTRTRDLALIKASLSIVNGVLFGFDAVFT 168

Query: 454 QR 459
            R
Sbjct: 169 FR 170


>UniRef50_Q7PSX2 Cluster: ENSANGP00000018625; n=2; Culicidae|Rep:
           ENSANGP00000018625 - Anopheles gambiae str. PEST
          Length = 131

 Score =  120 bits (289), Expect = 4e-26
 Identities = 56/121 (46%), Positives = 81/121 (66%), Gaps = 2/121 (1%)
 Frame = +1

Query: 103 LSIIKFLELALTCSCVALHYHSYNVDADI--GMLVTGTFVGYLIIFAGAAAGYIMQTPSH 276
           LSIIKFLEL+L  +C  LHY+S+N D D+  G L TGTF G+++I     AGY+M+   H
Sbjct: 9   LSIIKFLELSLAVTCTTLHYYSFN-DGDLVTGFLATGTFCGFIVILFTVMAGYLMKAHLH 67

Query: 277 KRIDIFYSLVGVALFVASGAIIIDRFQHYGKSEIKDKNLAKASLAIINGAILLVDAVLTQ 456
           +R+ IFYSL+G   F+ SG  II+ ++H  ++  +D  + K S+A+ING I L+D + T 
Sbjct: 68  RRLSIFYSLLGCVCFLTSGVFIIEAWEHAFRTRTRDLAITKGSIAVINGVIFLMDTIFTF 127

Query: 457 R 459
           R
Sbjct: 128 R 128


>UniRef50_UPI00015B56F3 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 562

 Score =  115 bits (276), Expect = 2e-24
 Identities = 56/113 (49%), Positives = 77/113 (68%)
 Frame = +1

Query: 124 ELALTCSCVALHYHSYNVDADIGMLVTGTFVGYLIIFAGAAAGYIMQTPSHKRIDIFYSL 303
           E  L C  + LHYHS     ++ ML TGT+ GY+II  G  AG +M TP ++R+D+F+SL
Sbjct: 450 EQLLACILIGLHYHSQTYGHEM-MLTTGTYCGYVIILVGLFAGGVMGTPVNRRVDLFFSL 508

Query: 304 VGVALFVASGAIIIDRFQHYGKSEIKDKNLAKASLAIINGAILLVDAVLTQRG 462
           VG ALF+ASGA++ID  QH    E  +K++AKAS++II G +  VDAV T +G
Sbjct: 509 VGCALFIASGAVVIDNHQH-ESGESFNKHMAKASISIIEGVLFFVDAVFTFKG 560


>UniRef50_UPI0000DB7553 Cluster: PREDICTED: similar to CG15449-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG15449-PA - Apis mellifera
          Length = 128

 Score = 97.5 bits (232), Expect = 3e-19
 Identities = 46/127 (36%), Positives = 76/127 (59%), Gaps = 2/127 (1%)
 Frame = +1

Query: 88  MAISRLSIIKFLELALTCSCVALHYHSYNVDADIGMLVT-GTFVGYLIIFAGAAAGYIMQ 264
           M +++ +I K +EL + C  + LHYHS++  + +   +T GTF GYLII  G   G I+ 
Sbjct: 1   MGMNKATIFKVVELIIVCVLIGLHYHSFSDSSLMSAFLTMGTFGGYLIILVGMCLGIILG 60

Query: 265 TPSHKRIDIFYSLVGVALFVASGAIIIDRF-QHYGKSEIKDKNLAKASLAIINGAILLVD 441
                R+D+F+S+VG  LF+ +GA+I+D F     +   ++  +AK  ++I+ G + L+D
Sbjct: 61  ATIDHRLDLFFSIVGCILFIIAGALILDHFINAVYRGNFRNTGIAKGLISIVQGVLFLID 120

Query: 442 AVLTQRG 462
           AV   RG
Sbjct: 121 AVFAFRG 127


>UniRef50_Q9W399 Cluster: CG7267-PB; n=2; Sophophora|Rep: CG7267-PB
           - Drosophila melanogaster (Fruit fly)
          Length = 125

 Score = 72.5 bits (170), Expect = 1e-11
 Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
 Frame = +1

Query: 88  MAISRLSIIKFLELALTCSCVALHYHSYNVDADIGMLVTGTFVGYLIIFAGAAAGYIMQT 267
           M  +   ++K +ELA+  +C+ L+    N+     ++V GT  GY +I      G+++ +
Sbjct: 1   MEFNNRLLLKIIELAIAIACIVLYETVGNLSLH-PVIVAGTVGGYTVICGVLLIGHVLNS 59

Query: 268 PSHKRIDIFYSLVGVALFVASGAIIIDRFQHYG--KSEIKDKNLAKASLAIINGAILLVD 441
              KR++  +SL+G  LFVASGA++ID + H G   ++ K + +   SL IIN A+ L+D
Sbjct: 60  LVEKRLNALFSLIGCLLFVASGALVIDEW-HGGLLNTDRKRQAIGAGSLMIINAAVFLLD 118

Query: 442 AV 447
            +
Sbjct: 119 TL 120


>UniRef50_Q9VW87 Cluster: CG6981-PA, isoform A; n=6;
           Endopterygota|Rep: CG6981-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 162

 Score = 40.7 bits (91), Expect = 0.042
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
 Frame = +1

Query: 181 ADIGMLVTGTFVGYLIIFAGAAAGYIMQTPSHK--RIDIFYSLVGVALFVASGAIIIDRF 354
           AD  ++ +G  VG+LI        +   T  HK    D   ++VG  +++A G + +  +
Sbjct: 50  ADAEIVASGVMVGFLIYTGCHTIAFAFGTTKHKGELCDTIMNVVGCIMWIAVGGVALHYW 109

Query: 355 QHYGKSE-------IKDKNLAKASLAIINGAILLVDAVL 450
           + Y   E        +   +A  SL +I GA+ L+D VL
Sbjct: 110 KGYMSDEGFLYVNSERQVGIAMGSLCVIEGALYLLDTVL 148


>UniRef50_A6FXM6 Cluster: ATP-dependent DNA helicase, UvrD/REP family
            protein; n=1; Plesiocystis pacifica SIR-1|Rep:
            ATP-dependent DNA helicase, UvrD/REP family protein -
            Plesiocystis pacifica SIR-1
          Length = 1027

 Score = 37.5 bits (83), Expect = 0.39
 Identities = 35/83 (42%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
 Frame = +2

Query: 182  RISACS-SPVPLSGTSSYSLV-RPRAT*CRLLHTNGSTSSIRWSVLPCSSLAVPLLLTDS 355
            R+ ACS SP P  GTS  S V RPR    R     G  SS R    PC S +       S
Sbjct: 859  RVGACSTSPRPGPGTSWCSWVKRPRGGPAR---ATGGGSSTR----PCPSSSGAAARASS 911

Query: 356  NIMVRARSKTRTWLRP----RWP 412
            +   RAR  TRT  RP    RWP
Sbjct: 912  SSSTRARPSTRTRARPPKTARWP 934


>UniRef50_UPI0000D610DB Cluster: Protein FAM77A.; n=1; Homo
           sapiens|Rep: Protein FAM77A. - Homo sapiens
          Length = 175

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +2

Query: 266 LLHTNGSTSSIRWSV-LPCSSLAVPLLLTDSNIMVRARSKTRTWLRPRWP 412
           +++T  +   + W+V + C  L V  LL DS ++  + S+ R+W R RWP
Sbjct: 1   MVYTLWAAVWVTWNVFIICFYLEVGGLLKDSELLTFSLSRHRSWWRERWP 50


>UniRef50_A2Q5Z5 Cluster: Putative uncharacterized protein; n=1;
           Medicago truncatula|Rep: Putative uncharacterized
           protein - Medicago truncatula (Barrel medic)
          Length = 2005

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 626 FSNC-FFFFV*RW*ENCLLIGNTKANKHQKNLWFPFKMYKSFAFLTQKKIE 775
           +++C + FF+  W     + G   A K +K+LW+P K+Y  F FL+   I+
Sbjct: 701 YASCGYLFFLLMW-----ISGRQLAGKTKKHLWYPMKVYAIFVFLSIYSID 746


>UniRef50_UPI000023E153 Cluster: predicted protein; n=1; Gibberella
           zeae PH-1|Rep: predicted protein - Gibberella zeae PH-1
          Length = 438

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
 Frame = -3

Query: 198 EHADIRIYI----VTVVVESHARTRKCQLQKLDDRQPAD-GHDSLLNLNFI 61
           +HA +  YI       V+ SHA     +L  LDD +P D G DS+ NLNF+
Sbjct: 177 KHATLFAYIPRDFAAYVLRSHASLEHLELGMLDDPKPGDVGIDSVDNLNFV 227


>UniRef50_Q4X706 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 158

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -2

Query: 730 ERKPEIFLVFISFSVTNQKT-VFLPPSHEKKKTITKQNIICIE 605
           +++ E FL F  F   N+K   F PP H KKK   K  ++C++
Sbjct: 86  KKEKEGFLFFFFFFFFNKKKKTFSPPPHTKKKKKKKAGVVCVK 128


>UniRef50_Q2FU28 Cluster: Putative uncharacterized protein; n=1;
           Methanospirillum hungatei JF-1|Rep: Putative
           uncharacterized protein - Methanospirillum hungatei
           (strain JF-1 / DSM 864)
          Length = 482

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = -3

Query: 360 MLESVNNNGTASDEQGNTDQRIEDVDPFV*RSLHYVARGRTSEYDEVPDKGTGDEHADIR 181
           MLE +++ GTA       D+  E+  P+V  S+   A     E +E  + G  +   DIR
Sbjct: 7   MLELLDDEGTADQLDLELDEPEEEASPYVDESIEEAA-PEPEESEEPEETGGRELEIDIR 65

Query: 180 IYIVTVV 160
           + IV +V
Sbjct: 66  LIIVAIV 72


>UniRef50_Q0YPF6 Cluster: Amino acid permease family protein; n=1;
           Chlorobium ferrooxidans DSM 13031|Rep: Amino acid
           permease family protein - Chlorobium ferrooxidans DSM
           13031
          Length = 664

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = +1

Query: 274 HKRIDIFYSL---VGVALFVASGAIIIDRFQHYGKSEIKDKNLAKASLAIINGAILLVDA 444
           H  + IF +L   + + +  +S + II+ F H G   +    L    + +I+G+ LL+D 
Sbjct: 63  HPTLGIFVALGTGITILIIASSYSHIIELFPHGGGGYLVASKLLSPEMGVISGSALLIDY 122

Query: 445 VLT 453
           +LT
Sbjct: 123 ILT 125


>UniRef50_A4BJN0 Cluster: Putative uncharacterized protein; n=1;
           Reinekea sp. MED297|Rep: Putative uncharacterized
           protein - Reinekea sp. MED297
          Length = 210

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = -3

Query: 258 YVARGRTSEYDE---VPDKGTGDEHADIRIYIVTVVVESHARTRKCQLQKLDDRQPADGH 88
           ++  GR   Y +   V ++ T  EH   R+  VT+  E H +  + QL+ + D + ++G 
Sbjct: 131 FLGNGRRLRYQDIRSVEERVTRGEHGSKRLMYVTMKQERHFKISELQLRAIKDSRDSNGF 190

Query: 87  DSLLN 73
             L+N
Sbjct: 191 YDLIN 195


>UniRef50_A2RAD1 Cluster: Contig An18c0080, complete genome.
           precursor; n=1; Aspergillus niger|Rep: Contig An18c0080,
           complete genome. precursor - Aspergillus niger
          Length = 590

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +2

Query: 200 SPVPLSGTSSYSLVRPRAT*CRLLHTNGSTSS-IRWSVLPCSSLAVPLLLTDSNIMVRAR 376
           S   L+G +S+SLV      C +L+   + S+ + + +LPCS L  P LL+   ++   +
Sbjct: 12  SATVLAGFTSWSLV------CLILNVREARSTGLPYVILPCSLLGAPWLLSQPVVLPLLK 65

Query: 377 SKTRTW 394
           +  RTW
Sbjct: 66  ALPRTW 71


>UniRef50_Q5QUC0 Cluster: Signaling protein with a MHYT sensor
           domain, PAS, GGDEF and EAL domains; n=1; Idiomarina
           loihiensis|Rep: Signaling protein with a MHYT sensor
           domain, PAS, GGDEF and EAL domains - Idiomarina
           loihiensis
          Length = 829

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
 Frame = +1

Query: 196 LVTGTFVGY---LIIFAGAAAGYIMQTPSHKRIDIFYSLVGVALFVASGAIIIDRFQHYG 366
           L+ GT +G    L+ + G AA   M+  +H R D  + ++ V + V+ G I +  ++HY 
Sbjct: 125 LIAGTVLGAGIGLMHYTGMAA---MEMSAHLRYDPLWFVLSVFVAVSLGIIALLAYRHYK 181

Query: 367 KSEIKDKNLAKASLAIINGAIL 432
           KSE +     + S  I+  AI+
Sbjct: 182 KSE-RTSWFRRRSAQIVVAAII 202


>UniRef50_A6CSI6 Cluster: Spore germination protein; n=1; Bacillus
           sp. SG-1|Rep: Spore germination protein - Bacillus sp.
           SG-1
          Length = 365

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 17/92 (18%)
 Frame = +1

Query: 127 LALTCSCVAL-HYHSYNVDADIGMLVTGTFVGYLI---IFAGAAAGYIMQTPSHKRI--- 285
           + LTC+ + L HY   N+  DI   VTG F G+LI   +F  A A  ++ + S+  I   
Sbjct: 55  IPLTCTLILLKHYGDRNI-IDISYKVTGNFFGFLIGMTLFLAAYAATVVDSRSYVDIINT 113

Query: 286 ---------DIFYSLVGVALFVAS-GAIIIDR 351
                     +F+ LVG + F+A+ G + I R
Sbjct: 114 MYFESTSSTHLFFVLVGSSYFLANRGLLAIGR 145


>UniRef50_UPI0000DAE593 Cluster: hypothetical protein
           Rgryl_01000671; n=1; Rickettsiella grylli|Rep:
           hypothetical protein Rgryl_01000671 - Rickettsiella
           grylli
          Length = 416

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
 Frame = +1

Query: 175 VDADIGMLVTG---TFVGYLIIFAGAAAGYIMQTPSHKRI--DIFYSLVGVALFVASGAI 339
           +D DIG++  G   T  G ++I  GA    +    + K I   +F +L GVA+  A+   
Sbjct: 203 IDKDIGIIAGGAVATVGGIVMIGVGAIGTVVTGGAAAKLIVAGVFTTLTGVAMITAASID 262

Query: 340 IIDRFQHYGKSEIKDKNLAKASLAIIN 420
           + ++ + YG++  K K L     A+ N
Sbjct: 263 LKNKQRDYGEALQKIKQLEDEMAALEN 289


>UniRef50_Q8ILJ8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1431

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = -1

Query: 713 FFGVY*L*CYQSKDSFLTTFTRKKKNNY*TKHNMYRNIEVT 591
           +F +Y +  Y SKD+F TT T+KKK+ +     + +NI +T
Sbjct: 863 YFFLYLMNIYFSKDNFYTTTTKKKKDIHIDIQEIIKNIYIT 903


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,808,032
Number of Sequences: 1657284
Number of extensions: 15965528
Number of successful extensions: 39293
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 37838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39264
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -