Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_D13
         (614 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1248|AAF58685.2|  138|Drosophila melanogaster CG9067-PA...   135   4e-32
AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA...    32   0.54 
AE014298-3027|AAF50900.3| 1073|Drosophila melanogaster CG1695-PA...    30   2.2  

>AE013599-1248|AAF58685.2|  138|Drosophila melanogaster CG9067-PA
           protein.
          Length = 138

 Score =  135 bits (327), Expect = 4e-32
 Identities = 68/151 (45%), Positives = 98/151 (64%)
 Frame = +2

Query: 62  MAVCVAVIGKDNSPLYIGGIGNDTSSDNELSRQWLVHTALDALEERLTTANPNNSGTNTT 241
           MA C+AVIGKDN+PLY+      +  + EL  Q+ V+ ALD +EE+              
Sbjct: 1   MAFCIAVIGKDNAPLYL----TTSDMEQELELQYHVNAALDVVEEKCLIGK--------- 47

Query: 242 TARTDLRDLYLGLLFSTDTHKIYGYVTNTRIKLVLVTSSTSPSGSNIRDAEVRTALRRLH 421
               + ++LYLGLL+ST+ HKIYG+VTNTR+K ++V  S++ +   +R+ EVR   R LH
Sbjct: 48  -GAPESKELYLGLLYSTENHKIYGFVTNTRVKFIVVIDSSNVA---LRENEVRAIFRNLH 103

Query: 422 ALYADAICNPFHLPGDQITSPKFDKQVKNIM 514
            LY DAICNPF++PG+ +TS KFD+ V+ +M
Sbjct: 104 LLYTDAICNPFYIPGESLTSKKFDRAVQKLM 134


>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
            protein.
          Length = 4498

 Score = 32.3 bits (70), Expect = 0.54
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
 Frame = +2

Query: 134  SSDNELSRQWLVHTALDALEERLTTANPNNSGTNTTTARTDLRDLYLGLLFS--TDTHKI 307
            S D+E S      T      E  TT     + T TTT   +L D+      S  T T   
Sbjct: 1106 SPDSETSTPTTTSTTTTEQPELDTTTTTPKTTTTTTTGNNELNDVNNVDEDSEVTKTKTQ 1165

Query: 308  YGYVTNTRIKLVLVTSSTSPSGSNIRDAE 394
            Y Y T  R ++   T++ + + +N  +AE
Sbjct: 1166 YKYATTNRRRITTTTTTATKNSNNNNNAE 1194


>AE014298-3027|AAF50900.3| 1073|Drosophila melanogaster CG1695-PA,
            isoform A protein.
          Length = 1073

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = +3

Query: 108  TLVASATTPAATMSCPGSGSCTRRWT--PWRRGSPLRILTIQERTQPLPELICGTCI 272
            T V +ATTP+ + SCPG+ S + R +    RRG P R  ++  R Q L   + G+ +
Sbjct: 1006 TDVINATTPSRSCSCPGAWSFSFRPSSRTSRRGGPHRQPSVSHR-QFLETSVAGSVL 1061


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,956,687
Number of Sequences: 53049
Number of extensions: 599897
Number of successful extensions: 1554
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1551
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)