Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_D13
         (614 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   2.4  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   2.4  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   2.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.1  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   5.5  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   5.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.6  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
 Frame = -2

Query: 157 PGQLIVAAGVVADATNVQRRIIFSDNS-NTHSHCKSIHLKSETKHRVVTQSCH 2
           PG L    G  +   N   R   +D    TH  C  +    E+KH +   + H
Sbjct: 32  PGTLWCGHGNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTASH 84


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
 Frame = -2

Query: 157 PGQLIVAAGVVADATNVQRRIIFSDNS-NTHSHCKSIHLKSETKHRVVTQSCH 2
           PG L    G  +   N   R   +D    TH  C  +    E+KH +   + H
Sbjct: 37  PGTLWCGHGNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTASH 89


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
 Frame = -2

Query: 157 PGQLIVAAGVVADATNVQRRIIFSDNS-NTHSHCKSIHLKSETKHRVVTQSCH 2
           PG L    G  +   N   R   +D    TH  C  +    E+KH +   + H
Sbjct: 37  PGTLWCGHGNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTASH 89


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 179  LDALEERLTTANPNNSGTNTTTARTDLRD 265
            +D L+  L  +NP N+G      R  L +
Sbjct: 1362 IDNLDVSLDVSNPKNAGKKKIDVRAKLNE 1390


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = +2

Query: 257 LRDLYLGLLFS--TDTHKIYGYVTNTRIKLVLVTSSTSPSGSNIRDAEVRTALRRLHALY 430
           + +LY G+++   +D  + Y   T +          T PS    + A  + AL +L  ++
Sbjct: 160 INELYPGVVYKCVSDNGESYAKFTISVTIDGETFEGTGPSKKLAKAAASKAALAKLRNVH 219

Query: 431 ADAICNP 451
           + + C P
Sbjct: 220 SSSFCIP 226


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 433 SVQSVQPAQRRPYFGIP 383
           S Q +QP Q+ PY  +P
Sbjct: 816 SSQPMQPPQQNPYMFLP 832


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 135  AATMSCPGSGSCTRRW 182
            +AT++C   G  TR W
Sbjct: 1330 SATLACNAVGDPTREW 1345


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 135  AATMSCPGSGSCTRRW 182
            +AT++C   G  TR W
Sbjct: 1326 SATLACNAVGDPTREW 1341


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,331
Number of Sequences: 438
Number of extensions: 3376
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)