Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_D05
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.4  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   6.0  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   7.9  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   7.9  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   7.9  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 229 AEGGRSVPGSGRQHGRGPSHL 291
           A GGR  PG  R     P+HL
Sbjct: 325 AGGGRRGPGPARSRRHLPAHL 345


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 536 YAFEDTLWAGLSD 574
           Y ++DTLW G  +
Sbjct: 315 YLYDDTLWVGFDN 327


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +1

Query: 340 SWYSSREAGARHQQTMRLWFP 402
           SWY+    GA+     ++W P
Sbjct: 27  SWYAGYHQGAQMGPEQQMWEP 47


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +1

Query: 340 SWYSSREAGARHQQTMRLWFP 402
           SWY+    GA+     ++W P
Sbjct: 27  SWYAGYHQGAQMGPEQQMWEP 47


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +1

Query: 235 GGRSVPGSGRQHGRGPSHLFITN 303
           GG  V GSG     GP +L   N
Sbjct: 82  GGDFVTGSGTSEMYGPDYLMSEN 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,974
Number of Sequences: 336
Number of extensions: 3528
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)