Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_D03
(503 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subuni... 98 2e-20
X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for ... 98 2e-20
CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein. 98 2e-20
CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein. 98 2e-20
BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase su... 98 2e-20
BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase su... 98 2e-20
BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase su... 98 2e-20
AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein. 98 2e-20
BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein. 87 2e-17
BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase su... 87 2e-17
BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase su... 87 2e-17
BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase su... 87 2e-17
BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase su... 87 2e-17
BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase su... 87 2e-17
AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase su... 87 2e-17
AL031594-1|CAI21907.1| 108|Homo sapiens protein ( Human DNA seq... 62 1e-09
AK057427-1|BAB71481.1| 123|Homo sapiens protein ( Homo sapiens ... 35 0.19
AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein. 34 0.24
BC116455-1|AAI16456.1| 125|Homo sapiens chromosome 1 open readi... 32 1.3
BC025793-1|AAH25793.1| 106|Homo sapiens C1orf31 protein protein. 32 1.3
AL355472-4|CAI22930.1| 79|Homo sapiens novel protein protein. 32 1.3
AL355472-3|CAI22929.1| 125|Homo sapiens novel protein protein. 32 1.3
AL355472-2|CAI22928.1| 155|Homo sapiens novel protein protein. 32 1.3
AK127688-1|BAC87085.1| 129|Homo sapiens protein ( Homo sapiens ... 31 2.3
X58139-1|CAA41147.1| 17|Homo sapiens cytochrome-c oxidase prot... 31 3.0
AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein. 31 3.0
AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein. 31 3.0
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 30 4.0
Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein. 29 7.0
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 29 7.0
>X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subunit
VIb protein.
Length = 86
Score = 97.9 bits (233), Expect = 2e-20
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 FPNQNQTRHCYQSYVDFHRCQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEG 335
FPNQNQTR+C+Q+Y+DFHRCQK +G C +++RVY+SLCP WV WD QRAEG
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEG 80
Query: 336 TFAGRI 353
TF G+I
Sbjct: 81 TFPGKI 86
>X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for
cytochrome c oxidase subunit VIb (EC 1.9.3.1). ).
Length = 86
Score = 97.9 bits (233), Expect = 2e-20
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 FPNQNQTRHCYQSYVDFHRCQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEG 335
FPNQNQTR+C+Q+Y+DFHRCQK +G C +++RVY+SLCP WV WD QRAEG
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEG 80
Query: 336 TFAGRI 353
TF G+I
Sbjct: 81 TFPGKI 86
>CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 97.9 bits (233), Expect = 2e-20
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 FPNQNQTRHCYQSYVDFHRCQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEG 335
FPNQNQTR+C+Q+Y+DFHRCQK +G C +++RVY+SLCP WV WD QRAEG
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEG 80
Query: 336 TFAGRI 353
TF G+I
Sbjct: 81 TFPGKI 86
>CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 97.9 bits (233), Expect = 2e-20
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 FPNQNQTRHCYQSYVDFHRCQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEG 335
FPNQNQTR+C+Q+Y+DFHRCQK +G C +++RVY+SLCP WV WD QRAEG
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEG 80
Query: 336 TFAGRI 353
TF G+I
Sbjct: 81 TFPGKI 86
>BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase
subunit VIb protein.
Length = 86
Score = 97.9 bits (233), Expect = 2e-20
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 FPNQNQTRHCYQSYVDFHRCQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEG 335
FPNQNQTR+C+Q+Y+DFHRCQK +G C +++RVY+SLCP WV WD QRAEG
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEG 80
Query: 336 TFAGRI 353
TF G+I
Sbjct: 81 TFPGKI 86
>BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 97.9 bits (233), Expect = 2e-20
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 FPNQNQTRHCYQSYVDFHRCQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEG 335
FPNQNQTR+C+Q+Y+DFHRCQK +G C +++RVY+SLCP WV WD QRAEG
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEG 80
Query: 336 TFAGRI 353
TF G+I
Sbjct: 81 TFPGKI 86
>BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 97.9 bits (233), Expect = 2e-20
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 FPNQNQTRHCYQSYVDFHRCQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEG 335
FPNQNQTR+C+Q+Y+DFHRCQK +G C +++RVY+SLCP WV WD QRAEG
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEG 80
Query: 336 TFAGRI 353
TF G+I
Sbjct: 81 TFPGKI 86
>AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein.
Length = 86
Score = 97.9 bits (233), Expect = 2e-20
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 FPNQNQTRHCYQSYVDFHRCQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEG 335
FPNQNQTR+C+Q+Y+DFHRCQK +G C +++RVY+SLCP WV WD QRAEG
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEG 80
Query: 336 TFAGRI 353
TF G+I
Sbjct: 81 TFPGKI 86
>BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein.
Length = 88
Score = 87.4 bits (207), Expect = 2e-17
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 FPNQNQTRHCYQSYVDFHRCQKVR---GEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEG 335
FP+QNQ R+CYQ+++D+HRC K R G+ +PC Y+ RVY SLCP WV+ W+ Q G
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNG 82
Query: 336 TFAGRI 353
FAG+I
Sbjct: 83 IFAGKI 88
>BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 87.4 bits (207), Expect = 2e-17
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 FPNQNQTRHCYQSYVDFHRCQKVR---GEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEG 335
FP+QNQ R+CYQ+++D+HRC K R G+ +PC Y+ RVY SLCP WV+ W+ Q G
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNG 82
Query: 336 TFAGRI 353
FAG+I
Sbjct: 83 IFAGKI 88
>BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 87.4 bits (207), Expect = 2e-17
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 FPNQNQTRHCYQSYVDFHRCQKVR---GEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEG 335
FP+QNQ R+CYQ+++D+HRC K R G+ +PC Y+ RVY SLCP WV+ W+ Q G
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNG 82
Query: 336 TFAGRI 353
FAG+I
Sbjct: 83 IFAGKI 88
>BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 87.4 bits (207), Expect = 2e-17
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 FPNQNQTRHCYQSYVDFHRCQKVR---GEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEG 335
FP+QNQ R+CYQ+++D+HRC K R G+ +PC Y+ RVY SLCP WV+ W+ Q G
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNG 82
Query: 336 TFAGRI 353
FAG+I
Sbjct: 83 IFAGKI 88
>BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 87.4 bits (207), Expect = 2e-17
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 FPNQNQTRHCYQSYVDFHRCQKVR---GEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEG 335
FP+QNQ R+CYQ+++D+HRC K R G+ +PC Y+ RVY SLCP WV+ W+ Q G
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNG 82
Query: 336 TFAGRI 353
FAG+I
Sbjct: 83 IFAGKI 88
>BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 87.4 bits (207), Expect = 2e-17
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 FPNQNQTRHCYQSYVDFHRCQKVR---GEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEG 335
FP+QNQ R+CYQ+++D+HRC K R G+ +PC Y+ RVY SLCP WV+ W+ Q G
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNG 82
Query: 336 TFAGRI 353
FAG+I
Sbjct: 83 IFAGKI 88
>AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb testes-specific isoform precursor protein.
Length = 88
Score = 87.4 bits (207), Expect = 2e-17
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Frame = +3
Query: 165 FPNQNQTRHCYQSYVDFHRCQKVR---GEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEG 335
FP+QNQ R+CYQ+++D+HRC K R G+ +PC Y+ RVY SLCP WV+ W+ Q G
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNG 82
Query: 336 TFAGRI 353
FAG+I
Sbjct: 83 IFAGKI 88
>AL031594-1|CAI21907.1| 108|Homo sapiens protein ( Human DNA
sequence from clone RP4-591N18 on chromosome
22q13.1-13.2.33 Contains the C22orf34 gene for
chromosome 22 open reading frame 34. ).
Length = 108
Score = 62.1 bits (144), Expect = 1e-09
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +3
Query: 165 FPNQNQTRHCYQSYVDFHRCQKVR----GEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAE 332
FPNQNQTR+ +Q Y+D H +K G C +++ VY+SLCP W WD+ +
Sbjct: 21 FPNQNQTRNGWQKYLDLHHFKKAMTAKGGGDVSVCEWYQHVYKSLCPIPWASAWDDHGQK 80
Query: 333 GTFAGR 350
F GR
Sbjct: 81 AHFLGR 86
>AK057427-1|BAB71481.1| 123|Homo sapiens protein ( Homo sapiens
cDNA FLJ32865 fis, clone TESTI2003649, weakly similar to
GLYCOPROTEIN X PRECURSOR. ).
Length = 123
Score = 34.7 bits (76), Expect = 0.19
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +1
Query: 142 NSTFRPTX--SLTKIRRGTATKVTWTSTVARK---FAAKNTSHATISRECTGLSAPMSGS 306
N RP+ S + R TAT+ +WT+T A + A + S A+ CT AP +G
Sbjct: 11 NGRRRPSTRASPARTRSVTATRTSWTTTAASRPGPAAGRARSPASTISACTTRCAPSAGW 70
Query: 307 TSGTTSAPKAPSP 345
+GT+ + SP
Sbjct: 71 RAGTSRSRTGFSP 83
>AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein.
Length = 901
Score = 34.3 bits (75), Expect = 0.24
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +1
Query: 205 TWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPS 342
T T++ + + +T H+T+S T +++P + + +G TS P +PS
Sbjct: 10 TETTSHSTPSFSSSTIHSTVSSSTTAITSPFTTAETGVTSTPSSPS 55
>BC116455-1|AAI16456.1| 125|Homo sapiens chromosome 1 open reading
frame 31 protein.
Length = 125
Score = 31.9 bits (69), Expect = 1.3
Identities = 11/53 (20%), Positives = 25/53 (47%)
Frame = +3
Query: 168 PNQNQTRHCYQSYVDFHRCQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQR 326
P+ + + C+ + ++ +C E C + + S CP +W+ +D +R
Sbjct: 50 PSMKERQVCWGARDEYWKCLDENLEDASQCKKLRSSFESSCPQQWIKYFDKRR 102
>BC025793-1|AAH25793.1| 106|Homo sapiens C1orf31 protein protein.
Length = 106
Score = 31.9 bits (69), Expect = 1.3
Identities = 11/53 (20%), Positives = 25/53 (47%)
Frame = +3
Query: 168 PNQNQTRHCYQSYVDFHRCQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQR 326
P+ + + C+ + ++ +C E C + + S CP +W+ +D +R
Sbjct: 31 PSMKERQVCWGARDEYWKCLDENLEDASQCKKLRSSFESSCPQQWIKYFDKRR 83
>AL355472-4|CAI22930.1| 79|Homo sapiens novel protein protein.
Length = 79
Score = 31.9 bits (69), Expect = 1.3
Identities = 11/53 (20%), Positives = 25/53 (47%)
Frame = +3
Query: 168 PNQNQTRHCYQSYVDFHRCQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQR 326
P+ + + C+ + ++ +C E C + + S CP +W+ +D +R
Sbjct: 4 PSMKERQVCWGARDEYWKCLDENLEDASQCKKLRSSFESSCPQQWIKYFDKRR 56
>AL355472-3|CAI22929.1| 125|Homo sapiens novel protein protein.
Length = 125
Score = 31.9 bits (69), Expect = 1.3
Identities = 11/53 (20%), Positives = 25/53 (47%)
Frame = +3
Query: 168 PNQNQTRHCYQSYVDFHRCQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQR 326
P+ + + C+ + ++ +C E C + + S CP +W+ +D +R
Sbjct: 50 PSMKERQVCWGARDEYWKCLDENLEDASQCKKLRSSFESSCPQQWIKYFDKRR 102
>AL355472-2|CAI22928.1| 155|Homo sapiens novel protein protein.
Length = 155
Score = 31.9 bits (69), Expect = 1.3
Identities = 11/53 (20%), Positives = 25/53 (47%)
Frame = +3
Query: 168 PNQNQTRHCYQSYVDFHRCQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQR 326
P+ + + C+ + ++ +C E C + + S CP +W+ +D +R
Sbjct: 80 PSMKERQVCWGARDEYWKCLDENLEDASQCKKLRSSFESSCPQQWIKYFDKRR 132
>AK127688-1|BAC87085.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ45786 fis, clone NETRP2008488. ).
Length = 129
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 378 KHRERLG-SKSYRRRCLRRAGCPTCRPTHWGRET 280
K R++ G K RR+ LR+A CP+ RP G +T
Sbjct: 58 KGRQKAGLEKGNRRKELRQANCPSLRPQRKGADT 91
>X58139-1|CAA41147.1| 17|Homo sapiens cytochrome-c oxidase
protein.
Length = 17
Score = 30.7 bits (66), Expect = 3.0
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 303 VDKWDNQRAEGTFAGRI 353
V WD QRAEGTF G+I
Sbjct: 1 VTDWDEQRAEGTFPGKI 17
>AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 30.7 bits (66), Expect = 3.0
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 247 TSHATISRECTGLSAPMSGSTSGTTSAPKAPS 342
T ++T+S T +++P + + +G TS P +PS
Sbjct: 1 TIYSTVSSSTTAITSPFTTAETGVTSTPSSPS 32
>AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 30.7 bits (66), Expect = 3.0
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 247 TSHATISRECTGLSAPMSGSTSGTTSAPKAPS 342
T ++T+S T +++P + + +G TS P +PS
Sbjct: 1 TIYSTVSSSTTAITSPFTTAETGVTSTPSSPS 32
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 30.3 bits (65), Expect = 4.0
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +1
Query: 136 PQNSTFR-PTXSLTKIRRGTATKVTWTSTVAR---KFAAKNTSHATISRECTGLSAPMSG 303
PQ ST PT S T + T TST + ++ TS T + + +SAP +
Sbjct: 795 PQTSTTSSPTTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTASTISAPTTS 854
Query: 304 STSGTTSAPKAP 339
+TS T++ +P
Sbjct: 855 TTSFHTTSTTSP 866
Score = 29.1 bits (62), Expect = 9.2
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 142 NSTFRPTXSLTKIRRGTATKVTWTSTVARKFAAKNTSH--ATISRECTGL-SAPMSGSTS 312
++T PT S T + T + +ST + + ++ +TIS T SAP + +TS
Sbjct: 679 STTSAPTTSTTSTPQTTTSSAPTSSTTSAPTTSTISAPTTSTISAPTTSTTSAPTASTTS 738
Query: 313 GTTSAPKAPS 342
TS AP+
Sbjct: 739 APTSTSSAPT 748
>Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein.
Length = 477
Score = 29.5 bits (63), Expect = 7.0
Identities = 22/69 (31%), Positives = 30/69 (43%)
Frame = +1
Query: 124 IARRPQNSTFRPTXSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSG 303
I+ R + PT S T + T T TST + + TS S+ S+ SG
Sbjct: 223 ISARTTSIISAPTTSTTSFPTTSTTSATTTSTTSAP-TSSTTSTPQTSKTSAATSSTTSG 281
Query: 304 STSGTTSAP 330
SGTT +P
Sbjct: 282 --SGTTPSP 288
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 29.5 bits (63), Expect = 7.0
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 142 NSTFRPTXSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTSGTT 321
++T PT T + T V TST++ + T S ++ +S T+ TT
Sbjct: 2275 STTSAPTARTTSAPTTSTTSVPTTSTISGPKTTPSPV-PTTSTTSAATTSTISAPTTSTT 2333
Query: 322 SAP-KAPSPV 348
S P PSPV
Sbjct: 2334 SVPGTTPSPV 2343
Score = 29.1 bits (62), Expect = 9.2
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +1
Query: 136 PQNSTFRPTXSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGL---SAPMSGS 306
P PT S + ++ T + TST + + +H T + SAP + +
Sbjct: 2233 PSGRAISPTQSTSSWQKSRTTTLVTTSTTSTPQTSTTYAHTTSTTSAPTARTTSAPTTST 2292
Query: 307 TS----GTTSAPK-APSPV 348
TS T S PK PSPV
Sbjct: 2293 TSVPTTSTISGPKTTPSPV 2311
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,959,084
Number of Sequences: 237096
Number of extensions: 1357052
Number of successful extensions: 4347
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4326
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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