Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_D03
(503 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 24 1.0
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 1.4
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 1.4
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 1.8
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 1.8
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 1.8
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 1.8
AF487333-1|AAL93262.1| 80|Apis mellifera integrin betaPS protein. 23 2.4
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 3.2
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 5.5
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 7.3
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 21 7.3
AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin prot... 21 7.3
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 9.6
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 23.8 bits (49), Expect = 1.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 156 THGFPNQNQTRHCYQSYVDF 215
THGFPN Q + +Q +D+
Sbjct: 230 THGFPNDAQP-YIFQEVIDY 248
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 23.4 bits (48), Expect = 1.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 154 RPTXSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGL 285
+ T L K+ K T T +ARK KNT+ SR + L
Sbjct: 322 KKTVPLKKVNSKYILKSTLTPKLARKQFQKNTTGLERSRSWSSL 365
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.4 bits (48), Expect = 1.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 91 LAVSWIYFNRKWQPHNRFTNENRQYVH 11
L++S R W+P F N YVH
Sbjct: 107 LSLSIKMLERIWRPDTYFYNGKHSYVH 133
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 91 LAVSWIYFNRKWQPHNRFTNENRQYVH 11
LA+S R W+P F N Y+H
Sbjct: 75 LALSISMLARIWKPDTYFYNGKHSYLH 101
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 1.8
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -2
Query: 91 LAVSWIYFNRKWQPHNRFTNENRQYVH 11
L+V + W P F NE + Y H
Sbjct: 83 LSVGSEFIKNIWVPDTFFVNEKQSYFH 109
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 1.8
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -2
Query: 91 LAVSWIYFNRKWQPHNRFTNENRQYVH 11
L+V + W P F NE + Y H
Sbjct: 83 LSVGSEFIKNIWVPDTFFVNEKQSYFH 109
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.0 bits (47), Expect = 1.8
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -2
Query: 91 LAVSWIYFNRKWQPHNRFTNENRQYVH 11
L+V + W P F NE + Y H
Sbjct: 22 LSVGSEFIKNIWVPDTFFVNEKQSYFH 48
>AF487333-1|AAL93262.1| 80|Apis mellifera integrin betaPS protein.
Length = 80
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 98 ISNMPEMIKSPADLKTAPF 154
+S MP+ +K P D AP+
Sbjct: 9 VSTMPKSLKEPCDGCAAPY 27
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.2 bits (45), Expect = 3.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 270 RVYRSLCPNEWVDKWDNQRAEGTFAGRI 353
R++ NE VDK N+RA G +I
Sbjct: 376 RIFSPHEENESVDKHPNRRARGQLRTKI 403
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.4 bits (43), Expect = 5.5
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 18 YCLFSFVKRLCGC 56
YCLFSF+ + C
Sbjct: 148 YCLFSFLNTIVYC 160
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = -2
Query: 91 LAVSWIYFNRKWQPHNRFTNENRQYVH 11
L +S + + W P F N+ ++H
Sbjct: 106 LTLSGDFAEKIWVPDTFFANDKNSFLH 132
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 21.0 bits (42), Expect = 7.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 238 AKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPSPVG 351
A TS AT S E + +A ++ + +PSP G
Sbjct: 29 ACTTSPATASLESSLSAAAVAAAAVNYAQQHNSPSPTG 66
>AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin
protein.
Length = 124
Score = 21.0 bits (42), Expect = 7.3
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 315 PTCRPTHWGRETCTLS*NSSMARIFRRELSGNGG 214
PT G+E + S NS IF+R L G G
Sbjct: 31 PTGHQEMQGKEKNSASLNSENFGIFKRALMGFQG 64
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/26 (26%), Positives = 12/26 (46%)
Frame = -1
Query: 263 IVAWLVFFAANFLATVEVHVTLVAVP 186
++ WL FF N + + +T P
Sbjct: 629 LICWLPFFTCNIMDAICTKLTADCQP 654
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,362
Number of Sequences: 438
Number of extensions: 2861
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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