Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_D02
         (425 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015971-1|AAH15971.1|   63|Homo sapiens ubiquinol-cytochrome c ...    72   7e-13
BC005402-1|AAH05402.1|   63|Homo sapiens ubiquinol-cytochrome c ...    72   7e-13
AB028598-1|BAB20672.1|   63|Homo sapiens ubiquinol-cytochrome C ...    72   7e-13

>BC015971-1|AAH15971.1|   63|Homo sapiens ubiquinol-cytochrome c
           reductase complex (7.2 kD) protein.
          Length = 63

 Score = 72.1 bits (169), Expect = 7e-13
 Identities = 31/58 (53%), Positives = 43/58 (74%)
 Frame = +3

Query: 72  SLWSTLNRTVFKRTSTFALAVAGGTFFFERTFELVSQSIFENLNKGKLWKDIKHKYEN 245
           +L S L   +F+RTSTFAL +  G  FFER F+  + +I++++N+GKLWK IKHKYEN
Sbjct: 5   TLTSKLYSLLFRRTSTFALTIIVGVMFFERAFDQGADAIYDHINEGKLWKHIKHKYEN 62


>BC005402-1|AAH05402.1|   63|Homo sapiens ubiquinol-cytochrome c
           reductase complex (7.2 kD) protein.
          Length = 63

 Score = 72.1 bits (169), Expect = 7e-13
 Identities = 31/58 (53%), Positives = 43/58 (74%)
 Frame = +3

Query: 72  SLWSTLNRTVFKRTSTFALAVAGGTFFFERTFELVSQSIFENLNKGKLWKDIKHKYEN 245
           +L S L   +F+RTSTFAL +  G  FFER F+  + +I++++N+GKLWK IKHKYEN
Sbjct: 5   TLTSKLYSLLFRRTSTFALTIIVGVMFFERAFDQGADAIYDHINEGKLWKHIKHKYEN 62


>AB028598-1|BAB20672.1|   63|Homo sapiens ubiquinol-cytochrome C
           reductase complex 7.2 kDa protein homologue protein.
          Length = 63

 Score = 72.1 bits (169), Expect = 7e-13
 Identities = 31/58 (53%), Positives = 43/58 (74%)
 Frame = +3

Query: 72  SLWSTLNRTVFKRTSTFALAVAGGTFFFERTFELVSQSIFENLNKGKLWKDIKHKYEN 245
           +L S L   +F+RTSTFAL +  G  FFER F+  + +I++++N+GKLWK IKHKYEN
Sbjct: 5   TLTSKLYSLLFRRTSTFALTIIVGVMFFERAFDQGADAIYDHINEGKLWKHIKHKYEN 62


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,019,557
Number of Sequences: 237096
Number of extensions: 514719
Number of successful extensions: 886
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)