Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_D01
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    29   0.027
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   1.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.5  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   9.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 29.5 bits (63), Expect = 0.027
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 284 VYFTVFKI*SRYFES*KITVIKNRFVT 364
           V+FTVF +   Y  S  + ++KNRFVT
Sbjct: 528 VFFTVFNVVHCYLASELVLMLKNRFVT 554


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +2

Query: 284 VYFTVFKI*SRYFES*KITVIKNRFVTELTTLLIITHQKGFVQDQKQAVV 433
           ++FTVF +   Y  +  + +++ RFV     L  IT  K F    + AV+
Sbjct: 171 IFFTVFNVAQCYLTTELVLMLQTRFVILNKQLTKIT-VKNFATKTQSAVL 219


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +2

Query: 185 CKIFHSIIDVNISEFII*NILI 250
           CK+  SI+D  + + ++ N L+
Sbjct: 561 CKVMKSILDNKVEKVVVSNRLV 582


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 385 HHTSKRFCSGSKTSSR*LSCISR 453
           HH  +R  SGS++SS    C SR
Sbjct: 798 HHYGRRERSGSESSSISERCSSR 820


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = -1

Query: 346 NHCNLSRFKVPTLYFKNSKIYPSISILREQYCY*YILNDK 227
           + C L   ++    F+N  +  S + L+E+  Y Y  N++
Sbjct: 1   SQCKLHFDEMSYSQFENQAVLQSYNFLQEKTTYEYYENNQ 40


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 211 CQHIRIYHLKYINSSTVLLIYLL 279
           C+H   Y   YI+    LL+YL+
Sbjct: 148 CRHTVEYFQNYIHFFYQLLLYLI 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,962
Number of Sequences: 336
Number of extensions: 3193
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)