Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_C23
         (439 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    26   0.14 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   1.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   3.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   3.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   6.8  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   6.8  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 26.2 bits (55), Expect = 0.14
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 253 IRYIFAINKILFYINMGRKTQFKSIKILKRLS*TF 149
           +RY+F  + +LF   + R  ++K  +IL  LS  F
Sbjct: 138 VRYVFVTSYLLFDYFVQRNQEYKYYQILSHLSGIF 172


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = -3

Query: 287 LSFKLYIYIHMYKIYFCYK*NTI---LH*YGQKN-TI*IYKNLKTSLLNIFKISTSALVL 120
           L FKLY  +H++ I   Y  ++       YG  N T+ I   +   +L  F +S   +++
Sbjct: 23  LRFKLYTIVHIFIIIALYAHSSYGRENFIYGSMNMTVAITDKIANFMLTFFNVSLRIILV 82


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 220 FYINMGRKTQFKSIKILKRLS*TFLKLALRPLSYR 116
           F+  + RK    ++KIL ++  T     L+P+  R
Sbjct: 87  FFNILFRKKLLNAVKILSKIDETLNSKPLKPVKIR 121


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 220 FYINMGRKTQFKSIKILKRLS*TFLKLALRPLSYR 116
           F+  + RK    ++KIL ++  T     L+P+  R
Sbjct: 83  FFNILFRKKLLNAVKILSKIDETLNSKPLKPVKIR 117


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 224 YFIYSKNISY 253
           Y+IYSK+ SY
Sbjct: 14  YYIYSKHYSY 23


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 180 IDLNCVFLPILM*NSILFIAKIYLIHVNIN 269
           + L+  ++PI++ + IL IA I   + N+N
Sbjct: 4   VKLHKHYVPIILLSKILGIAPISYKNSNVN 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,134
Number of Sequences: 336
Number of extensions: 1575
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)