Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_C23
         (439 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1323|AAF54658.2|  788|Drosophila melanogaster CG5342-PA...    28   4.8  

>AE014297-1323|AAF54658.2|  788|Drosophila melanogaster CG5342-PA
           protein.
          Length = 788

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +3

Query: 156 QERRFKIFIDLNCVFLPILM*NSILFIAKIYLIHVNI 266
           ++RRF+  +D +C ++P+L+     F  K Y  HV+I
Sbjct: 328 KQRRFRALLDYSCNYMPVLIKGMDYF--KDYYRHVSI 362


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,103,356
Number of Sequences: 53049
Number of extensions: 217558
Number of successful extensions: 576
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)