Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_C22
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   6.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   6.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   6.1  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = -2

Query: 652 KSFSFTRPFSPAALIILCIFKSKIYSTFLSLSR-----SSPNHTIKYQFSILIWFWSLVG 488
           K+F F         +I   ++   +S+FL +S      +SP   + Y+F I  +  SL+ 
Sbjct: 527 KNFCFGFITKQLIFMIFVTYQLYCWSSFLKISVLQSLWASPTCDLMYEFQIFTFLMSLLQ 586

Query: 487 FIK 479
            IK
Sbjct: 587 SIK 589


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 580 YSTFLSLSRSSPNHTIKYQFSILIW 506
           Y+   S+   +P HT  Y   I +W
Sbjct: 111 YANASSVGSRNPIHTSSYMTGIWVW 135


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 580 YSTFLSLSRSSPNHTIKYQFSILIW 506
           Y+   S+   +P HT  Y   I +W
Sbjct: 344 YANASSVGSRNPIHTSSYMTGIWVW 368


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 580 YSTFLSLSRSSPNHTIKYQFSILIW 506
           Y+   S+   +P HT  Y   I +W
Sbjct: 344 YANASSVGSRNPIHTSSYMTGIWVW 368


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,458
Number of Sequences: 336
Number of extensions: 3282
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)