Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_C22
(755 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4H3.07c |||protein phosphatase Fmp31 |Schizosaccharomyces po... 94 2e-20
SPCC4B3.01 ||SPCP25A2.01c|thiosulfate sulfurtransferase|Schizosa... 36 0.006
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 27 2.2
SPBC800.08 |gcd10||translation initiation factor eIF-3 gamma sub... 26 6.7
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 26 6.7
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom... 25 8.8
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 25 8.8
SPAC4G9.14 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr 1... 25 8.8
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 25 8.8
>SPAC4H3.07c |||protein phosphatase Fmp31 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 171
Score = 94.3 bits (224), Expect = 2e-20
Identities = 47/108 (43%), Positives = 65/108 (60%)
Frame = +2
Query: 323 YDEVVKAISNNNILLIDVREPDEVKEHGHIPNSINIPLGTISTVLGEMSDKEFNKTYKRP 502
Y+ + + + +LIDVREPDE K+ G I S N+P+G I + ++SD+EF+KTY
Sbjct: 64 YNLSKRPTGDKSTVLIDVREPDEFKQ-GAIETSYNLPVGKIEEAM-KLSDEEFSKTYGFS 121
Query: 503 KPNQNTELIFYCMVGRRSAKAQESAINLGFKNTKNYQGSWTEWASKGK 646
KP ++ YC GRRS A + LG+KN NY GSW EW+ K K
Sbjct: 122 KPVFEDNVVVYCRSGRRSTTASDILTKLGYKNIGNYTGSWLEWSDKIK 169
>SPCC4B3.01 ||SPCP25A2.01c|thiosulfate
sulfurtransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 298
Score = 35.9 bits (79), Expect = 0.006
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Frame = +2
Query: 314 VADYDEVVKAISNNN---ILLIDVREPDE----VKEH------GHIPNSINIPL--GTIS 448
VA +D++VK I + + + ++D R + V E GHIP SINIP T +
Sbjct: 162 VASFDDIVKVIESPDAAGVHIVDARAHERFLGNVPESRPGLASGHIPTSINIPFTETTAA 221
Query: 449 TVLGEMSDKEFNKTY-KRPKPNQNTELIFYCMVGRRSAKAQESAINLGFKNTKNYQGSWT 625
+ +++ K + +++ +I C G ++ + GFK+ + Y SW+
Sbjct: 222 GITAPKPEEDLEKVFSSHGLTDKSVPIITSCGSGVTASVLFAALKECGFKDVRVYDESWS 281
Query: 626 EWASK 640
+ +
Sbjct: 282 GYGKR 286
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 27.5 bits (58), Expect = 2.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 602 KNYQGSWTEWASK 640
KN QGSW EW SK
Sbjct: 575 KNMQGSWHEWESK 587
>SPBC800.08 |gcd10||translation initiation factor eIF-3 gamma
subunit Gcd10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 462
Score = 25.8 bits (54), Expect = 6.7
Identities = 15/85 (17%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Frame = +2
Query: 167 IIRKSRTTSAGYLKLNYARKQLSSNEYKAIPQSNALSLRLYSESKVETKVADYDEVVKAI 346
+++K + + ++ + LS + IP+S ++L + ETK A ++ + I
Sbjct: 245 LVQKGILKTLNWYQVTNPTETLSEYSVEDIPESELNEMKLRHRKRYETKKATFNRLKNTI 304
Query: 347 SN------NNILLIDVREPDEVKEH 403
+ + + ++ + P V +H
Sbjct: 305 DDFESGNYDALFILSIHTPMSVLQH 329
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 395 KEHGHIPNSINIPLGTISTVLGEMSDKEFNKTYKRPKPNQNTELIFY 535
K +GHI +I + +S+++GE ++ + K ++ E+I Y
Sbjct: 1406 KAYGHIERHRDILVNDLSSIIGESYNRAYGIMVKSQMLSELEEIIDY 1452
>SPAC1296.03c |sxa2||serine carboxypeptidase
Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 25.4 bits (53), Expect = 8.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 82 SLLQFIHFIKRNCITTRHVSLWTSHNTVNNTKVS 183
SL F+ +++ +C+ T VSL S N N+ ++
Sbjct: 332 SLSNFLLYLENSCVITYDVSLDCSFNEYNDPLIT 365
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 25.4 bits (53), Expect = 8.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 326 DEVVKAISNNNILLIDVREPDEVKEHGHIPNSIN 427
+E + ++ IL D+R PD V+ + H IN
Sbjct: 367 NEFLAGTADKRILQFDIRSPDIVQAYDHHLGGIN 400
>SPAC4G9.14 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 221
Score = 25.4 bits (53), Expect = 8.8
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 646 FSFTRPFSPAAL-IILCIFKSKIYSTFLSLSRSSPN 542
F+FT F P L +I S +++ +LSL SSPN
Sbjct: 185 FNFT--FVPLVLQVIFANAVSMVWTAYLSLKNSSPN 218
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.4 bits (53), Expect = 8.8
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 203 LKLNYARKQLSSNEYKAIPQSNALSLRLYSE-SKVETKVADYDEVVKAISNNNILLIDVR 379
LK K+ EY+ + + + L SE + + KVAD++ + +S + L+D R
Sbjct: 1291 LKSELESKRKLEVEYQKVLEEVKTTRSLRSEVTLLRNKVADHESIRSKLSEVEMKLVDTR 1350
Query: 380 E 382
+
Sbjct: 1351 K 1351
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,718,372
Number of Sequences: 5004
Number of extensions: 51570
Number of successful extensions: 154
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 361294920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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