BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_C22
(755 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 28 0.36
AJ237706-1|CAB40347.1| 570|Anopheles gambiae putative 5'-nucleo... 24 5.8
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 27.9 bits (59), Expect = 0.36
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 146 GRRITQLIIRKSRTTSAGYLK--LNYARKQLSSN 241
G+R+ Q++ K RTT+ GY + +NYA + + N
Sbjct: 538 GKRLQQMMPSKHRTTAEGYTQRPVNYAVETIEHN 571
>AJ237706-1|CAB40347.1| 570|Anopheles gambiae putative
5'-nucleotidase protein.
Length = 570
Score = 23.8 bits (49), Expect = 5.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 293 ESKVETKVADYDEVVKAISNNNILLIDVR 379
++K +T DY VVK +N+ +L+ R
Sbjct: 268 DTKYDTIEGDYPLVVKKSNNHTVLITQAR 296
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,550
Number of Sequences: 2352
Number of extensions: 11154
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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