Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_C21
         (814 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.7  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   5.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   6.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   6.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   8.8  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 467 LKSIVFIITKLCFLI*IYISWLLRSGL 387
           LK ++F  +  C L  IY+ W   S L
Sbjct: 6   LKRVLFFFSFCCILFFIYLYWQQTSNL 32


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 269 YCNDYDRDMRKCLKAERLQR 328
           Y N Y+ ++   LK+ERL +
Sbjct: 20  YTNQYNDELDAALKSERLMK 39


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 345 MNLDNATLIFEHEF*PRAQQPTDIYLN 425
           +++ N TLI +  F PR +Q   ++LN
Sbjct: 639 LSVGNMTLILDKFFFPRWRQTLAMWLN 665


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 360 RCLDSSRLAFCL*SLSAFKHFL 295
           RC++S+ ++F L +   F +FL
Sbjct: 78  RCIESNMISFYLEATDDFAYFL 99


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 650 ITKLTSTLVKLIV*TILSKEK 712
           I  LTST + LIV  +  KEK
Sbjct: 83  IVTLTSTSILLIVNAVFVKEK 103


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 299 SSCRDHNHCNNL 264
           S C +H HC NL
Sbjct: 36  SICGEHGHCVNL 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,254
Number of Sequences: 336
Number of extensions: 3187
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)