Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_C21
         (814 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0152 - 1070249-1070296,1070443-1070515,1070601-1070671,107...    32   0.62 
09_02_0496 - 9892242-9892499,9892956-9893045,9893046-9893094,989...    28   7.7  
01_06_0302 - 28318910-28318999,28319118-28319210,28319303-283193...    28   7.7  

>02_01_0152 -
           1070249-1070296,1070443-1070515,1070601-1070671,
           1070768-1070874,1071836-1072007
          Length = 156

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +1

Query: 658 INFNIGKIDRLNNSVXXXXXXXXXXXXXXXVICKIEFSDESVFEVPCCXKGT 813
           ++FN+GK DR    V                +CK+  S  S F V CC KG+
Sbjct: 73  VDFNVGKSDRSEMKVTGKRKRNAQHLQENSALCKVCTSSNS-FVVRCCVKGS 123


>09_02_0496 -
           9892242-9892499,9892956-9893045,9893046-9893094,
           9893330-9893557,9894095-9894261,9894312-9894395,
           9894614-9894820,9894919-9895251,9895371-9895513,
           9895607-9895723,9895824-9895980,9896054-9896157,
           9896272-9896432,9896518-9896707,9896732-9896834,
           9896950-9897231,9897327-9897649,9897750-9897786,
           9898109-9898162,9898292-9898368,9898449-9898502,
           9898738-9898822,9900289-9900426,9900592-9900603
          Length = 1150

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +1

Query: 406 QLIYI*IRKHSFVIMKTMDFNILDSIPDLDNLKTFTERYFSKRYLINVD 552
           Q++Y   R H     K++ F  L+ I   D L+  T R   K+Y I+ D
Sbjct: 227 QVVYSGPRDHVLEFFKSLGFKCLERIGVADFLQEVTSRKDQKQYWIHGD 275


>01_06_0302 -
           28318910-28318999,28319118-28319210,28319303-28319383,
           28319483-28319633,28319716-28319783,28319989-28320143,
           28320268-28320326,28320649-28320899
          Length = 315

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 751 ICKIEFSDESVFEVPCCXKGT 813
           IC+ E  DES  E PCC KG+
Sbjct: 61  ICQEE-GDESYMETPCCCKGS 80


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,548,441
Number of Sequences: 37544
Number of extensions: 277427
Number of successful extensions: 554
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)