Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_C16
(758 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 25 0.87
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 24 1.5
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 23 2.6
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 23 2.6
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 23 2.6
AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory recept... 23 2.6
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 21 8.1
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 21 8.1
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 21 8.1
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 24.6 bits (51), Expect = 0.87
Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +3
Query: 252 PGYPIQQNQGYP-QSTAQYPTQGVPYPTHQSQGYPQSTAQYPTQG 383
P P+ + P Q+T PTQ PT S T + P G
Sbjct: 392 PPEPVPTPEPQPTQTTESEPTQASEQPTESSTTQKPQTTKTPESG 436
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = +3
Query: 321 PYPTHQSQGYPQSTAQYPTQGVPYPNHQSQGYPQS 425
P PT ++ P ++ PT+ Q+ P+S
Sbjct: 401 PQPTQTTESEPTQASEQPTESSTTQKPQTTKTPES 435
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 23.8 bits (49), Expect = 1.5
Identities = 20/65 (30%), Positives = 26/65 (40%)
Frame = +3
Query: 99 PNQQFPPNVGFNNLTPQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQPGYPIQQNQ 278
PNQ + P NLT S+ N +NP+ P +S YPQ G
Sbjct: 346 PNQIYQPVTNLTNLTYPSYYN--QDVSCTHYQNPEYISVVNP---ESPYPQIGSERATPV 400
Query: 279 GYPQS 293
GY Q+
Sbjct: 401 GYHQN 405
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 238 LPILSPVILFSRIKAIHKVLLNTRHRV 318
L I PV + ++ A+H L +T H +
Sbjct: 252 LAISDPVFIVDQVAALHIKLTDTAHMI 278
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 238 LPILSPVILFSRIKAIHKVLLNTRHRV 318
L I PV + ++ A+H L +T H +
Sbjct: 252 LAISDPVFIVDQVAALHIKLTDTAHMI 278
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 410 LTLVIRVWNTLCRVLSSTLWIALTLVSRVWNTLCRVLS 297
+ LV+ + + + LS+ + LTL + WN L + L+
Sbjct: 133 IKLVLNILSDVTLWLSNVNSLTLTLKRKKWNLLFKTLT 170
Score = 21.4 bits (43), Expect = 8.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 434 LSSALWITLTLVIRVWNTLCRVLS 363
LS+ +TLTL + WN L + L+
Sbjct: 147 LSNVNSLTLTLKRKKWNLLFKTLT 170
>AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory receptor
candidate 12 protein.
Length = 316
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 410 LTLVIRVWNTLCRVLSSTLWIALTLVSRVWNTLCRVLS 297
+ LV+ + + + LS+ + LTL + WN L + L+
Sbjct: 59 IKLVLNILSDVTLWLSNVNSLTLTLKRKKWNLLFKTLT 96
Score = 21.4 bits (43), Expect = 8.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 434 LSSALWITLTLVIRVWNTLCRVLS 363
LS+ +TLTL + WN L + L+
Sbjct: 73 LSNVNSLTLTLKRKKWNLLFKTLT 96
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/32 (28%), Positives = 13/32 (40%)
Frame = +3
Query: 303 YPTQGVPYPTHQSQGYPQSTAQYPTQGVPYPN 398
YP Y H ++ +P P G+P N
Sbjct: 162 YPPPPPVYTHHYARYHPYPNFGVPPAGIPLQN 193
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 21.4 bits (43), Expect = 8.1
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +3
Query: 210 GQGYPLPAQSAYPQPGYPIQQNQGYPQSTAQYPTQGVPYPTHQSQGYP 353
G+ LP +PG QN+ Q A+Y + Y + G P
Sbjct: 400 GEVAHLPNTHMGHEPGAAYYQNENMLQKNAEYSGKVGYYENNHYNGDP 447
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 21.4 bits (43), Expect = 8.1
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +3
Query: 210 GQGYPLPAQSAYPQPGYPIQQNQGYPQSTAQYPTQGVPYPTHQSQGYP 353
G+ LP +PG QN+ Q A+Y + Y + G P
Sbjct: 348 GEVAHLPNTHMGHEPGAAYYQNENMLQKNAEYSGKVGYYENNHYNGDP 395
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,256
Number of Sequences: 336
Number of extensions: 4490
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -