Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_C16
(758 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 29 0.063
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 28 0.083
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 26 0.44
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 25 1.0
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 23 2.4
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 23 3.1
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 5.4
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 21 9.5
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 28.7 bits (61), Expect = 0.063
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 267 QQNQGYPQSTAQYPTQGVPYPTHQSQGYPQSTAQ 368
QQ Q PQ +Q P Q P P Q Q Q Q
Sbjct: 1511 QQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQ 1544
Score = 27.1 bits (57), Expect = 0.19
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +3
Query: 336 QSQGYPQSTAQYPTQGVPYPNHQSQGYPQSTAQ 434
Q Q PQ +Q P Q P P Q Q Q Q
Sbjct: 1512 QQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQ 1544
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 28.3 bits (60), Expect = 0.083
Identities = 23/82 (28%), Positives = 29/82 (35%)
Frame = +3
Query: 108 QFPPNVGFNNLTPQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQPGYPIQQNQGYP 287
Q PPN G + ++P S S ++ SPA G LP + P P P N
Sbjct: 379 QPPPNFGVSQVSPVSMSALVSAVRSPA---------GGQLPPSAGAPMPPIPNMSNMSGM 429
Query: 288 QSTAQYPTQGVPYPTHQSQGYP 353
P PT S P
Sbjct: 430 PPLPNMPGSMPTMPTMPSMAGP 451
Score = 27.5 bits (58), Expect = 0.14
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = +3
Query: 267 QQNQGYPQSTAQYPTQGVPYPTHQSQGYPQSTAQYPTQGVPYPNHQSQGYP 419
QQ Q +Q P+ G P P Q P + Q P +G P PN SQG P
Sbjct: 3 QQKQPIITQQSQQPSSGAPGP----QPSPHQSPQAPQRGSP-PN-PSQGPP 47
Score = 24.6 bits (51), Expect = 1.0
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = +3
Query: 330 THQSQGYPQSTAQYPTQGVPYPN---HQSQGYPQ-STAQYPTQG 449
T Q Q +Q P+ G P P HQS PQ + P+QG
Sbjct: 2 TQQKQPIITQQSQQPSSGAPGPQPSPHQSPQAPQRGSPPNPSQG 45
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 25.8 bits (54), Expect = 0.44
Identities = 23/99 (23%), Positives = 34/99 (34%), Gaps = 4/99 (4%)
Frame = +3
Query: 285 PQSTAQYPTQGVPYPTHQSQGYPQSTAQYPTQGVPYPNHQSQGYPQSTAQY---PTQGFX 455
P Q+ T P+P + G +PT + SQ P+ +Y P+QG
Sbjct: 1739 PSKAMQFQT--FPHPGNGHSGTMGPPVGHPTNASAHSRSGSQSMPRQNGRYSRVPSQGGG 1796
Query: 456 XXXXXXXXXXXXXXTDHG-FRSQPGSIYGNQGHPPNQFG 569
+ Q GS YG G P + +G
Sbjct: 1797 SGTHNVFSPEYDDPANCAPEEDQYGSQYGQYGAPYDHYG 1835
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 24.6 bits (51), Expect = 1.0
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 200 SSTRTGLSTTCSICLSSA---RLSYSAESRLSTKYCSIPDTGCSIPYSPESRLSTKY 361
SSTRT + T C S+ ++ + L T I D+ C I P+ R T+Y
Sbjct: 241 SSTRTAETGTIRKCDESSPHDQVIIGGSNGLDTSKVHIIDSICGIDSKPDYRELTEY 297
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 23.4 bits (48), Expect = 2.4
Identities = 14/56 (25%), Positives = 22/56 (39%)
Frame = +3
Query: 261 PIQQNQGYPQSTAQYPTQGVPYPTHQSQGYPQSTAQYPTQGVPYPNHQSQGYPQST 428
P+ ++Q + Q Q+P HQSQ Q + + QSQ Q +
Sbjct: 162 PLVESQMHHQMHTQHPHMQPQQGQHQSQAQQQHLQAHEQHMMYQQQQQSQAASQQS 217
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -1
Query: 380 LCRVLSSTLWIA 345
+CRVL +T+W+A
Sbjct: 84 VCRVLHTTVWVA 95
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -1
Query: 314 LCRVLSSTLWIA 279
+CRVL +T+W+A
Sbjct: 84 VCRVLHTTVWVA 95
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.2 bits (45), Expect = 5.4
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 291 STAQYPTQGVPYPTHQSQGYPQSTAQYPTQGV 386
S AQ+ T P P G P S Q T V
Sbjct: 386 SGAQFATPCTPSPPRGPGGVPTSVIQAATSSV 417
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 177 GSPAMRNPQVPGQGYPLPAQSAY 245
G+P P+V Q P PA Y
Sbjct: 216 GTPGYTAPEVIKQNRPTPAADIY 238
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,951
Number of Sequences: 438
Number of extensions: 4934
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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