Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_C15
         (754 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.8  
AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.    24   5.8  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 534  LEEKIKAGLLKSPDKDQKEKMSKKNEILNEIDILENSI 647
            LE  I  G+  +   D K K  K  +I+N   ++ NSI
Sbjct: 1129 LEVAIGDGMEFTIHGDLKNKAKKNKQIMNNSKVIGNSI 1166


>AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.
          Length = 145

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
 Frame = +3

Query: 39  VEIQIEILCIIMSTPT--AYEHDADGSK-FIPATQRPDGTWRKP---RRIKEGYVPQEEV 200
           V I + ++C++ +TPT  +  H     K F   TQ  D T +KP   +R K G   Q   
Sbjct: 8   VLIALGVICLLQTTPTSASTNHVQQLMKVFRSMTQNFDYT-KKPSYLQRAKYGVQNQLRN 66

Query: 201 PLYESKGKQFR-ARQNDG 251
           PL +  G   + A+ +DG
Sbjct: 67  PLVQKAGNLPKSAKLSDG 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,229
Number of Sequences: 2352
Number of extensions: 10660
Number of successful extensions: 64
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)