Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_C15
         (754 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK096922-1|BAC04897.1|  203|Homo sapiens protein ( Homo sapiens ...   102   1e-21
BC014976-1|AAH14976.1|  204|Homo sapiens within bgcn homolog (Dr...    95   2e-19
BC006135-1|AAH06135.1|  204|Homo sapiens within bgcn homolog (Dr...    95   2e-19
AJ459406-1|CAD30677.1|  204|Homo sapiens PYM protein protein.          95   2e-19

>AK096922-1|BAC04897.1|  203|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39603 fis, clone SKNSH2005120, weakly similar to
           Drosophila melanogaster WIBG (wibg) mRNA. ).
          Length = 203

 Score =  102 bits (245), Expect = 1e-21
 Identities = 66/203 (32%), Positives = 101/203 (49%), Gaps = 14/203 (6%)
 Frame = +3

Query: 72  MSTPTAYEHDADGSKFIPATQRPDGTWRKPRRIKEGYVPQEEVPLYESKGKQFRARQNDG 251
           M+TP  Y  D  G K+I +TQRPDGTWRK RR+KEGYVPQEEVP+YE+K  +F  +    
Sbjct: 1   MATP--YVTDETGGKYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKF-FKSKPE 57

Query: 252 LPVGLTPEIVAQA--QKKKGQRSTIQPIPGMIIXXXXXXXXXXXXXXXXXAAEKLAKCEI 425
           LP GL+PE  A     + +G    +       +                  +  L K  +
Sbjct: 58  LPPGLSPEATAPVTPSRPEGGEPGLSKTAKRNLKRKEKRRQQQEKGEAEALSRTLDKVSL 117

Query: 426 QE----PTLP--SQSVPTESISQSDPTXXXXXX------XXXXXEIEFLEEKIKAGLLKS 569
           +E    P+ P  S++ PT +  Q D                   ++E L+++I+AG +  
Sbjct: 118 EETAQLPSAPQGSRAAPTAASDQPDSAATTEKAKKIKNLKKKLRQVEELQQRIQAGEVSQ 177

Query: 570 PDKDQKEKMSKKNEILNEIDILE 638
           P K+Q EK++++  +  E++ LE
Sbjct: 178 PSKEQLEKLARRRALEEELEDLE 200


>BC014976-1|AAH14976.1|  204|Homo sapiens within bgcn homolog
           (Drosophila) protein.
          Length = 204

 Score = 95.5 bits (227), Expect = 2e-19
 Identities = 60/189 (31%), Positives = 94/189 (49%), Gaps = 14/189 (7%)
 Frame = +3

Query: 114 KFIPATQRPDGTWRKPRRIKEGYVPQEEVPLYESKGKQFRARQNDGLPVGLTPEIVAQA- 290
           K+I +TQRPDGTWRK RR+KEGYVPQEEVP+YE+K  +F  +    LP GL+PE  A   
Sbjct: 14  KYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKF-FKSKPELPPGLSPEATAPVT 72

Query: 291 -QKKKGQRSTIQPIPGMIIXXXXXXXXXXXXXXXXXAAEKLAKCEIQE----PTLP--SQ 449
             + +G    +       +                  +  L K  ++E    P+ P  S+
Sbjct: 73  PSRPEGGEPGLSKTAKRNLKRKEKRRQQQEKGEAEALSRTLDKVSLEETAQLPSAPQGSR 132

Query: 450 SVPTESISQSDPTXXXXXX------XXXXXEIEFLEEKIKAGLLKSPDKDQKEKMSKKNE 611
           + PT +  Q D                   ++E L+++I+AG +  P K+Q EK++++  
Sbjct: 133 AAPTAASDQPDSAATTEKAKKIKNLKKKLRQVEELQQRIQAGEVSQPSKEQLEKLARRRA 192

Query: 612 ILNEIDILE 638
           +  E++ LE
Sbjct: 193 LEEELEDLE 201


>BC006135-1|AAH06135.1|  204|Homo sapiens within bgcn homolog
           (Drosophila) protein.
          Length = 204

 Score = 95.5 bits (227), Expect = 2e-19
 Identities = 60/189 (31%), Positives = 94/189 (49%), Gaps = 14/189 (7%)
 Frame = +3

Query: 114 KFIPATQRPDGTWRKPRRIKEGYVPQEEVPLYESKGKQFRARQNDGLPVGLTPEIVAQA- 290
           K+I +TQRPDGTWRK RR+KEGYVPQEEVP+YE+K  +F  +    LP GL+PE  A   
Sbjct: 14  KYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKF-FKSKPELPPGLSPEATAPVT 72

Query: 291 -QKKKGQRSTIQPIPGMIIXXXXXXXXXXXXXXXXXAAEKLAKCEIQE----PTLP--SQ 449
             + +G    +       +                  +  L K  ++E    P+ P  S+
Sbjct: 73  PSRPEGGEPGLSKTAKRNLKRKEKRRQQQEKGEAEALSRTLDKVSLEETAQLPSAPQGSR 132

Query: 450 SVPTESISQSDPTXXXXXX------XXXXXEIEFLEEKIKAGLLKSPDKDQKEKMSKKNE 611
           + PT +  Q D                   ++E L+++I+AG +  P K+Q EK++++  
Sbjct: 133 AAPTAASDQPDSAATTEKAKKIKNLKKKLRQVEELQQRIQAGEVSQPSKEQLEKLARRRA 192

Query: 612 ILNEIDILE 638
           +  E++ LE
Sbjct: 193 LEEELEDLE 201


>AJ459406-1|CAD30677.1|  204|Homo sapiens PYM protein protein.
          Length = 204

 Score = 95.5 bits (227), Expect = 2e-19
 Identities = 60/189 (31%), Positives = 94/189 (49%), Gaps = 14/189 (7%)
 Frame = +3

Query: 114 KFIPATQRPDGTWRKPRRIKEGYVPQEEVPLYESKGKQFRARQNDGLPVGLTPEIVAQA- 290
           K+I +TQRPDGTWRK RR+KEGYVPQEEVP+YE+K  +F  +    LP GL+PE  A   
Sbjct: 14  KYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKF-FKSKPELPPGLSPEATAPVT 72

Query: 291 -QKKKGQRSTIQPIPGMIIXXXXXXXXXXXXXXXXXAAEKLAKCEIQE----PTLP--SQ 449
             + +G    +       +                  +  L K  ++E    P+ P  S+
Sbjct: 73  PSRPEGGEPGLSKTAKRNLKRKEKRRQQQEKGEAEALSRTLDKVSLEETAQLPSAPQGSR 132

Query: 450 SVPTESISQSDPTXXXXXX------XXXXXEIEFLEEKIKAGLLKSPDKDQKEKMSKKNE 611
           + PT +  Q D                   ++E L+++I+AG +  P K+Q EK++++  
Sbjct: 133 AAPTAASDQPDSAASTEKAKKIKNLKKKLRQVEELQQRIQAGEVSQPSKEQLEKLARRRA 192

Query: 612 ILNEIDILE 638
           +  E++ LE
Sbjct: 193 LEEELEDLE 201


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,157,853
Number of Sequences: 237096
Number of extensions: 1514644
Number of successful extensions: 3112
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3107
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)